RNA–Protein interactions for RNA: ENST00000467124.1

VPS13A-209, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 5

Gene VPS13A, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-209ENST00000467124 CRTC1Q6UUV9 634 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.88□□□□□ -1.63
VPS13A-209ENST00000467124 ZNF280BQ86YH2 543 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 CACNA2D3Q8IZS8 1091 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 FANCBQ8NB91 859 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 ZFP28Q8NHY6 868 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 SPSB4Q96A44 273 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 MARS2Q96GW9 593 aaKnown RBP4.88□□□□□ -1.63
VPS13A-209ENST00000467124 SLC46A1Q96NT5 459 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 MEGF9Q9H1U4 602 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 SMOC2Q9H3U7 446 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 AGO4Q9HCK5 861 aaKnown RBP4.88□□□□□ -1.63
VPS13A-209ENST00000467124 VPS45Q9NRW7 570 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 DACT1Q9NYF0 836 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 GTF2A1LQ9UNN4 478 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 LZTS1Q9Y250 596 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 ATP11BQ9Y2G3 1177 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 SH3BP1Q9Y3L3 701 aa4.88□□□□□ -1.63
VPS13A-209ENST00000467124 MBD3L4A6NDZ8 208 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 MBD3L3A6NE82 208 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 DRGXA6NNA5 263 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 POLRMTO00411 1230 aaKnown RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 TRIM13O60858 407 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 GYS1P13807 737 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 VEGFAP15692 232 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 MGAT1P26572 445 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 IL1R2P27930 398 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 MSX2P35548 267 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 POU6F2P78424 691 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 POU5F1BQ06416 359 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 GRM7Q14831 915 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 RAB30Q15771 203 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 AMOTQ4VCS5 1084 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 PLA1AQ53H76 456 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 DCAF17Q5H9S7 520 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 ZFYVE27Q5T4F4 411 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 CACHD1Q5VU97 1274 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 SULT6B1Q6IMI4 303 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 DRICH1Q6PGQ1 229 aaPredicted RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 FAM83AQ86UY5 434 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 PDSS2Q86YH6 399 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 C1QL4Q86Z23 238 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 SYT12Q8IV01 421 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 CLASRPQ8N2M8 674 aaKnown RBP4.87□□□□□ -1.63
VPS13A-209ENST00000467124 CCDC150Q8NCX0 1101 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 SCAMP4Q969E2 229 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 ZSWIM1Q9BR11 485 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 PAGR1Q9BTK6 254 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 SPATA5L1Q9BVQ7 753 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 MAGEB5Q9BZ81 275 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 UBA5Q9GZZ9 404 aa4.87□□□□□ -1.63
VPS13A-209ENST00000467124 GOLGA6L3A6NEY3 463 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 hCG_1984214I3L0E3 225 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 LEFTY2O00292 366 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 DCLK1O15075 740 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 ASNA1O43681 348 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 RAD17O75943 681 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 USP1O94782 785 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 LMNAP02545 664 aaKnown RBP4.86□□□□□ -1.63
VPS13A-209ENST00000467124 PYGLP06737 847 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 CD53P19397 219 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 BTF3P20290 206 aaKnown RBP4.86□□□□□ -1.63
VPS13A-209ENST00000467124 ACVR2AP27037 513 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 CFPP27918 469 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 GABRB3P28472 473 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 LILRA4P59901 499 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 KRT17Q04695 432 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 LMOD3Q0VAK6 560 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 PRKG1Q13976 671 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 SPARCL1Q14515 664 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 SLC29A2Q14542 456 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 ZIK1Q3SY52 487 aaPredicted RBP4.86□□□□□ -1.63
VPS13A-209ENST00000467124 ALFQ53S48 1182 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 LCE1DQ5T752 114 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 FAM160B1Q5W0V3 765 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 TSHZ3Q63HK5 1081 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 RAP1GAP2Q684P5 730 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 TAPT1Q6NXT6 567 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 CATSPERGQ6ZRH7 1159 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 YAF2Q8IY57 180 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 CFAP52Q8N1V2 620 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 D2HGDHQ8N465 521 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 ST8SIA2Q92186 375 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 RILPL2Q969X0 211 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 LRIG1Q96JA1 1093 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 NEU1Q99519 415 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 GDF15Q99988 308 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 FAM167BQ9BTA0 163 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 MAF1Q9H063 256 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 PCDHAC1Q9H158 963 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 CASS4Q9NQ75 786 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 RGL1Q9NZL6 768 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 HESX1Q9UBX0 185 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 MRPS17Q9Y2R5 130 aaKnown RBP4.86□□□□□ -1.63
VPS13A-209ENST00000467124 DUSP10Q9Y6W6 482 aa4.86□□□□□ -1.63
VPS13A-209ENST00000467124 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 IPO5O00410 1097 aaKnown RBP4.85□□□□□ -1.63
VPS13A-209ENST00000467124 RASAL1O95294 804 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 CHEK2O96017 543 aa4.85□□□□□ -1.63
VPS13A-209ENST00000467124 PLATP00750 562 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms