RNA–Protein interactions for RNA: ENST00000467077.1

XRN1-206, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 674 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-206ENST00000467077 CUL5Q93034 780 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 VCPIP1Q96JH7 1222 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 KLHL13Q9P2N7 655 aa5.16□□□□□ -1.58
XRN1-206ENST00000467077 POLRMTO00411 1230 aaKnown RBP5.15□□□□□ -1.59
XRN1-206ENST00000467077 SRSF2Q01130 221 aaKnown RBP5.15□□□□□ -1.59
XRN1-206ENST00000467077 ZNF628Q5EBL2 1059 aa5.15□□□□□ -1.59
XRN1-206ENST00000467077 C16orf52Q8NHV5 167 aa5.15□□□□□ -1.59
XRN1-206ENST00000467077 FAM136AQ96C01 138 aa5.15□□□□□ -1.59
XRN1-206ENST00000467077 MFSD3Q96ES6 412 aa5.15□□□□□ -1.59
XRN1-206ENST00000467077 THOC3Q96J01 351 aaKnown RBP5.15□□□□□ -1.59
XRN1-206ENST00000467077 LRIG1Q96JA1 1093 aa5.15□□□□□ -1.59
XRN1-206ENST00000467077 TMX3Q96JJ7 454 aa5.15□□□□□ -1.59
XRN1-206ENST00000467077 HIPK2Q9H2X6 1198 aa5.15□□□□□ -1.59
XRN1-206ENST00000467077 BICRAQ9NZM4 1560 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 CD8B2A6NJW9 211 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 USP1O94782 785 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 SBK3P0C264 359 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 BPIP17213 487 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 NANOS2P60321 138 aaKnown RBP5.14□□□□□ -1.59
XRN1-206ENST00000467077 HTRA4P83105 476 aaPredicted RBP5.14□□□□□ -1.59
XRN1-206ENST00000467077 HOXA4Q00056 320 aaPredicted RBP5.14□□□□□ -1.59
XRN1-206ENST00000467077 SLC30A10Q6XR72 485 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 C16orf86Q6ZW13 317 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 RBMXL3Q8N7X1 1067 aaKnown RBP5.14□□□□□ -1.59
XRN1-206ENST00000467077 OR2I1PQ8NGU4 316 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 AMBRA1Q9C0C7 1298 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 IFT22Q9H7X7 185 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 PLAAQ9Y263 795 aa5.14□□□□□ -1.59
XRN1-206ENST00000467077 SOAT2O75908 522 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 ITGALP20701 1170 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 IL1R2P27930 398 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 CD6P30203 668 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 CYP2C18P33260 490 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 KCNJ5P48544 419 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 RBMS2Q15434 407 aaKnown RBP5.13□□□□□ -1.59
XRN1-206ENST00000467077 RBM20Q5T481 1227 aaKnown RBP5.13□□□□□ -1.59
XRN1-206ENST00000467077 NAPRTQ6XQN6 538 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 TRIM72Q6ZMU5 477 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 C9orf47Q6ZRZ4 202 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 IL17RDQ8NFM7 739 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 POC1BQ8TC44 478 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 LMBR1Q8WVP7 490 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 CTAGE1Q96RT6 745 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 PIF1Q9H611 641 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 MDFICQ9P1T7 246 aa5.13□□□□□ -1.59
XRN1-206ENST00000467077 APOBEC2Q9Y235 224 aaKnown RBP5.13□□□□□ -1.59
XRN1-206ENST00000467077 FNDC1Q4ZHG4 1894 aaPredicted RBP5.13□□□□□ -1.59
XRN1-206ENST00000467077 SLC43A1O75387 559 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 ANXA1P04083 346 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 TGFB3P10600 412 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 SCAND1P57086 179 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 NPY5RQ15761 445 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 TKFCQ3LXA3 575 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 CYP2W1Q8TAV3 490 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 COQ8BQ96D53 544 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 TTC1Q99614 292 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 FOXP1Q9H334 677 aaPredicted RBP5.12□□□□□ -1.59
XRN1-206ENST00000467077 TDP1Q9NUW8 608 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 DNAJC28Q9NX36 388 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 SLC45A2Q9UMX9 530 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 ICKQ9UPZ9 632 aa5.12□□□□□ -1.59
XRN1-206ENST00000467077 H3BNX3 289 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 ZEB2O60315 1214 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 T-ENOLP0DO92 83 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 OSMP13725 252 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 ATP5F1P24539 256 aaPredicted RBP5.11□□□□□ -1.59
XRN1-206ENST00000467077 CYP4F2P78329 520 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 FLYWCH1Q4VC44 716 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 CMIPQ8IY22 773 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 APPBP2Q92624 585 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 DAZAP1Q96EP5 407 aaKnown RBP5.11□□□□□ -1.59
XRN1-206ENST00000467077 DLL3Q9NYJ7 618 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 SQORQ9Y6N5 450 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 CC2D2AQ9P2K1 1620 aa5.11□□□□□ -1.59
XRN1-206ENST00000467077 LY6G6EA0A0G2JKS1 128 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 EME2A4GXA9 379 aaPredicted RBP5.1□□□□□ -1.59
XRN1-206ENST00000467077 ENGP17813 658 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 ZNF268Q14587 947 aaPredicted RBP5.1□□□□□ -1.59
XRN1-206ENST00000467077 DHCR24Q15392 516 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 DALRD3Q5D0E6 543 aaKnown RBP5.1□□□□□ -1.59
XRN1-206ENST00000467077 LVRNQ6Q4G3 990 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 C18orf65Q6ZTR6 163 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 MIGA2Q7L4E1 593 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 RAB24Q969Q5 203 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 RITA1Q96K30 269 aa5.1□□□□□ -1.59
XRN1-206ENST00000467077 DSCR3O14972 297 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 ABLIM3O94929 683 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 NPSP0C0P6 89 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 PRF1P14222 555 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 TRIM71Q2Q1W2 868 aaKnown RBP5.09□□□□□ -1.59
XRN1-206ENST00000467077 LRRC71Q8N4P6 559 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 ZC3H10Q96K80 434 aaKnown RBP5.09□□□□□ -1.59
XRN1-206ENST00000467077 TRMOQ9BU70 441 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 DUSP22Q9NRW4 184 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 POT1Q9NUX5 634 aa5.09□□□□□ -1.59
XRN1-206ENST00000467077 CECR2Q9BXF3 1484 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 E9PLN8 166 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 UBE2Q2LH0YL09 131 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 ADAM10O14672 748 aa5.08□□□□□ -1.6
XRN1-206ENST00000467077 ID4P47928 161 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms