RNA–Protein interactions for RNA: ENST00000466763.5

UBA3-209, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 2

Gene UBA3, Length 622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-209ENST00000466763 WARSP23381 471 aaKnown RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 PCSK1P29120 753 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 KCNQ1P51787 676 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 MARSP56192 900 aaKnown RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 MCCD1P59942 119 aaPredicted RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 GPR17Q13304 367 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 KCNJ12Q14500 433 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 LEXMQ3ZCV2 418 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 TPGS2Q68CL5 300 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 PTCRAQ6ISU1 281 aaPredicted RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 CCDC149Q6ZUS6 474 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 IRF2BP1Q8IU81 584 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.86□□□□□ -0.03
UBA3-209ENST00000466763 AOPEPQ8N6M6 819 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 HDAC7Q8WUI4 952 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 KBTBD7Q8WVZ9 684 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 ATXN2LQ8WWM7 1075 aaKnown RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 MSLNLQ96KJ4 702 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 ZCWPW1Q9H0M4 648 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 VRTNQ9H8Y1 702 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 SFXN1Q9H9B4 322 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 APOBEC3GQ9HC16 384 aaKnown RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 AFF4Q9UHB7 1163 aaKnown RBP14.86□□□□□ -0.03
UBA3-209ENST00000466763 TSC2P49815 1807 aa14.86□□□□□ -0.03
UBA3-209ENST00000466763 ATP2C2O75185 946 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 TACC1O75410 805 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 ZMYND10O75800 440 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 ABLIM3O94929 683 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 SEC24AO95486 1093 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 ATF2P15336 505 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 CD58P19256 250 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 LMO2P25791 158 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 PSMC1P62191 440 aaKnown RBP14.85□□□□□ -0.03
UBA3-209ENST00000466763 MYL5Q02045 173 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 ZSCAN23Q3MJ62 389 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 LRRTM3Q86VH5 581 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 ATAD1Q8NBU5 361 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 SPATA18Q8TC71 538 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 TATDN2Q93075 761 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 SYT15Q9BQS2 421 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 ACBD6Q9BR61 282 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 NIF3L1Q9GZT8 377 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 FANCLQ9NW38 375 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 ABI2Q9NYB9 513 aaPredicted RBP14.85□□□□□ -0.03
UBA3-209ENST00000466763 GTF3C4Q9UKN8 822 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 SLC27A5Q9Y2P5 690 aa14.85□□□□□ -0.03
UBA3-209ENST00000466763 TCF20Q9UGU0 1960 aaKnown RBP14.85□□□□□ -0.03
UBA3-209ENST00000466763 MTMR11A4FU01 709 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 GRXCR2A6NFK2 248 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 GABRDO14764 452 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 CCL16O15467 120 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 MBTPS2O43462 519 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 C1RP00736 705 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 LRG1P02750 347 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 FAM163BP0C2L3 166 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 CDK11BP21127 795 aaKnown RBP14.84□□□□□ -0.03
UBA3-209ENST00000466763 DUSP4Q13115 394 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 SMAD4Q13485 552 aaKnown RBP14.84□□□□□ -0.03
UBA3-209ENST00000466763 INTS6LQ5JSJ4 861 aaKnown RBP14.84□□□□□ -0.03
UBA3-209ENST00000466763 ATAT1Q5SQI0 421 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 LIMS2Q7Z4I7 341 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 SMRP1Q8NCR6 262 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 SMG7Q92540 1137 aaKnown RBP14.84□□□□□ -0.03
UBA3-209ENST00000466763 NT5C1BQ96P26 610 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 ASB2Q96Q27 587 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 SEPT5Q99719 369 aaPredicted RBP14.84□□□□□ -0.03
UBA3-209ENST00000466763 TUBGCP2Q9BSJ2 902 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 CRACR2AQ9BSW2 395 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 SDCBP2Q9H190 292 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 S1PR5Q9H228 398 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 ADAM7Q9H2U9 754 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 TMLHEQ9NVH6 421 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 CDH22Q9UJ99 828 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 CDH9Q9ULB4 789 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 FAM50BQ9Y247 325 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 COQ4Q9Y3A0 265 aa14.84□□□□□ -0.03
UBA3-209ENST00000466763 USP15Q9Y4E8 981 aaPredicted RBP14.84□□□□□ -0.03
UBA3-209ENST00000466763 MYBPHLA2RUH7 354 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 SMTNL1A8MU46 457 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 BECN2A8MW95 431 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 P4HA2O15460 535 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 XYLBO75191 536 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 TPM2P07951 284 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 IL9P15248 144 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 ASPAP45381 313 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 ZNF165P49910 485 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 CYP27A1Q02318 531 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 ITIH3Q06033 890 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 ORC1Q13415 861 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 MAN2A1Q16706 1144 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 UVSSAQ2YD98 709 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 PUS10Q3MIT2 529 aaKnown RBP14.83□□□□□ -0.04
UBA3-209ENST00000466763 MGAT5BQ3V5L5 792 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 TCP11X2Q5H9J9 407 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 MDH1BQ5I0G3 518 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 SPATA2LQ8IUW3 424 aaPredicted RBP14.83□□□□□ -0.04
UBA3-209ENST00000466763 EHBP1Q8NDI1 1231 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 ANKRD20A12PQ8NF67 263 aa14.83□□□□□ -0.04
UBA3-209ENST00000466763 FEZF2Q8TBJ5 459 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms