RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 CRYBB1P53674 252 aaPredicted RBP21.7■■□□□ 1.06
CCDC78-207ENST00000466708 PURAQ00577 322 aaKnown RBP21.7■■□□□ 1.06
CCDC78-207ENST00000466708 LRRC38Q5VT99 294 aa21.7■■□□□ 1.06
CCDC78-207ENST00000466708 BEST2Q8NFU1 509 aa21.7■■□□□ 1.06
CCDC78-207ENST00000466708 MCEEQ96PE7 176 aa21.7■■□□□ 1.06
CCDC78-207ENST00000466708 EIF2AQ9BY44 585 aaKnown RBP21.7■■□□□ 1.06
CCDC78-207ENST00000466708 HOMER3Q9NSC5 361 aa21.7■■□□□ 1.06
CCDC78-207ENST00000466708 CA12O43570 354 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 SGO2Q562F6 1265 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 ALKAL1Q6UXT8 129 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 CCDC105Q8IYK2 499 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 LRRC52Q8N7C0 313 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 C7orf31Q8N865 590 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 NIPA2Q8N8Q9 360 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 SLCO2A1Q92959 643 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 EXOC4Q96A65 974 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 TWNKQ96RR1 684 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 DPH5Q9H2P9 285 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 CNTN3Q9P232 1028 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 GOLGA8KD6RF30 607 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 TAS2R40P59535 323 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 MTMR3Q13615 1198 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 STILQ15468 1287 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 PTPN20Q4JDL3 420 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 TTC27Q6P3X3 843 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 NEUROG2Q9H2A3 272 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 PARP2Q9UGN5 583 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 WDR3Q9UNX4 943 aaKnown RBP eCLIP21.69■■□□□ 1.06
CCDC78-207ENST00000466708 USTQ9Y2C2 406 aa21.69■■□□□ 1.06
CCDC78-207ENST00000466708 TRIP11Q15643 1979 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 SIGLEC16A6NMB1 481 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 ZNF268Q14587 947 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-207ENST00000466708 TAF2Q6P1X5 1199 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 TMEM130Q8N3G9 435 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 PPP1R13LQ8WUF5 828 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 HEXIM2Q96MH2 286 aaKnown RBP21.68■■□□□ 1.06
CCDC78-207ENST00000466708 ZIM3Q96PE6 472 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 NT5C1AQ9BXI3 368 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 FAM129AQ9BZQ8 928 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 PSD3Q9NYI0 1048 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 HMGXB4Q9UGU5 601 aa21.68■■□□□ 1.06
CCDC78-207ENST00000466708 FEZ2Q9UHY8 353 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-207ENST00000466708 PIN4Q9Y237 131 aaKnown RBP21.68■■□□□ 1.06
CCDC78-207ENST00000466708 TRIP12Q14669 1992 aaPredicted RBP21.68■■□□□ 1.06
CCDC78-207ENST00000466708 O00370 1275 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 MICAL2O94851 1124 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 GJB6O95452 261 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 GABRB2P47870 512 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 NDST1P52848 882 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 MFSD14CQ5VZR4 134 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 CCDC50Q8IVM0 306 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 RCOR2Q8IZ40 523 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 FNIP1Q8TF40 1166 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 RBM41Q96IZ5 413 aaKnown RBP21.67■■□□□ 1.06
CCDC78-207ENST00000466708 ZMAT2Q96NC0 199 aaKnown RBP21.67■■□□□ 1.06
CCDC78-207ENST00000466708 TRIM31Q9BZY9 425 aa21.67■■□□□ 1.06
CCDC78-207ENST00000466708 UBQLN1Q9UMX0 589 aaKnown RBP21.67■■□□□ 1.06
CCDC78-207ENST00000466708 ECEL1O95672 775 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 KRT3P12035 628 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 ATF7P17544 494 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 SSR1P43307 286 aaKnown RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 FCGRTP55899 365 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 GJA9P57773 515 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 ZNF200P98182 395 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 SPDYCQ5MJ68 293 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 CYP4A22Q5TCH4 519 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 SYDE1Q6ZW31 735 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 TMEM40Q8WWA1 233 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 RIN2Q8WYP3 895 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 FMO2Q99518 471 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 CYTH4Q9UIA0 394 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 XPOTO43592 962 aaKnown RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 RECQL4O94761 1208 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 CTGFP29279 349 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 PSMC1P62191 440 aaKnown RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 DMTNQ08495 405 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 ZNF252P-AS1Q0IIN9 211 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 LRIG3Q6UXM1 1119 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 GRK7Q8WTQ7 553 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 PIK3R5Q8WYR1 880 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 ZBTB9Q96C00 473 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 HHIPL1Q96JK4 782 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 PKNOX2Q96KN3 472 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 MTG1Q9BT17 334 aaPredicted RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 OSBPL8Q9BZF1 889 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 MIS12Q9H081 205 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 NXF3Q9H4D5 531 aaKnown RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 SYNCQ9H7C4 482 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 ZDHHC18Q9NUE0 388 aa21.66■■□□□ 1.06
CCDC78-207ENST00000466708 DDX56Q9NY93 547 aaKnown RBP21.66■■□□□ 1.06
CCDC78-207ENST00000466708 M0QYV0 167 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 CD4P01730 458 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 C6orf222P0C671 652 aaPredicted RBP21.65■■□□□ 1.06
CCDC78-207ENST00000466708 RALAP11233 206 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 CYBAP13498 195 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 GPD2P43304 727 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 COPS2P61201 443 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 KLF1Q13351 362 aaPredicted RBP21.65■■□□□ 1.06
CCDC78-207ENST00000466708 ORC1Q13415 861 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 XKR4Q5GH76 650 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms