RNA–Protein interactions for RNA: ENST00000466543.1

CYTH3-205, Transcript of cytohesin 3, humanhuman

TSL 4

Gene CYTH3, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-205ENST00000466543 CHFRQ96EP1 664 aa18.61■□□□□ 0.57
CYTH3-205ENST00000466543 TASP1Q9H6P5 420 aa18.61■□□□□ 0.57
CYTH3-205ENST00000466543 C8orf33Q9H7E9 229 aaPredicted RBP18.61■□□□□ 0.57
CYTH3-205ENST00000466543 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.61■□□□□ 0.57
CYTH3-205ENST00000466543 VPS37CA5D8V6 355 aaPredicted RBP18.6■□□□□ 0.57
CYTH3-205ENST00000466543 HMGA1P17096 107 aaKnown RBP18.6■□□□□ 0.57
CYTH3-205ENST00000466543 PAX3P23760 479 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 ATXN1P54253 815 aaKnown RBP18.6■□□□□ 0.57
CYTH3-205ENST00000466543 PON2Q15165 354 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 CCDC142Q17RM4 750 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 ARHGAP29Q52LW3 1261 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 SLFN12LQ6IEE8 588 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 ITIH5Q86UX2 942 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 SPEM1Q8N4L4 309 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 KRI1Q8N9T8 703 aaKnown RBP18.6■□□□□ 0.57
CYTH3-205ENST00000466543 CXorf38Q8TB03 319 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 POMGNT1Q8WZA1 660 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 OBP2AQ9NY56 170 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 ABI2Q9NYB9 513 aaPredicted RBP18.6■□□□□ 0.57
CYTH3-205ENST00000466543 DSEQ9UL01 958 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 CCL26Q9Y258 94 aa18.6■□□□□ 0.57
CYTH3-205ENST00000466543 ZNF638Q14966 1978 aaKnown RBP18.59■□□□□ 0.57
CYTH3-205ENST00000466543 A0A087X0B3 334 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 OTOL1A6NHN0 477 aaPredicted RBP18.59■□□□□ 0.57
CYTH3-205ENST00000466543 KPNA7A9QM74 516 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 WEE1P30291 646 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 TUFMP49411 452 aaKnown RBP18.59■□□□□ 0.57
CYTH3-205ENST00000466543 NRLP54845 237 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 SPEM2Q0P670 501 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 RESTQ13127 1097 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 CUL4AQ13619 759 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 CCINQ13939 588 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 ARHGAP15Q53QZ3 475 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 SDHAF4Q5VUM1 108 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 PKN3Q6P5Z2 889 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 RALGPS2Q86X27 583 aaPredicted RBP18.59■□□□□ 0.57
CYTH3-205ENST00000466543 BPIFB1Q8TDL5 484 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 SAAL1Q96ER3 474 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 MSANTD3Q96H12 275 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 FAM213AQ9BRX8 229 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 ATG2BQ96BY7 2078 aa18.59■□□□□ 0.57
CYTH3-205ENST00000466543 DPYSL4O14531 572 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 HCRTO43612 131 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 FGF19O95750 216 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 F11P03951 625 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 POLR2BP30876 1174 aaKnown RBP18.58■□□□□ 0.56
CYTH3-205ENST00000466543 ABCD1P33897 745 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 POU5F1Q01860 360 aaKnown RBP18.58■□□□□ 0.56
CYTH3-205ENST00000466543 HEATR6Q6AI08 1181 aaKnown RBP18.58■□□□□ 0.56
CYTH3-205ENST00000466543 METTL23Q86XA0 190 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 PDCL2Q8N4E4 241 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 CELF5Q8N6W0 485 aaKnown RBP18.58■□□□□ 0.56
CYTH3-205ENST00000466543 C1orf127Q8N9H9 656 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 HVCN1Q96D96 273 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 MRPL44Q9H9J2 332 aaKnown RBP18.58■□□□□ 0.56
CYTH3-205ENST00000466543 HPS4Q9NQG7 708 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 STK17AQ9UEE5 414 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 USP18Q9UMW8 372 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 L1RE1Q9UN81 338 aa18.58■□□□□ 0.56
CYTH3-205ENST00000466543 SRPRBQ9Y5M8 271 aaKnown RBP18.58■□□□□ 0.56
CYTH3-205ENST00000466543 PAPSS2O95340 614 aaPredicted RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 CDC25CP30307 473 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 NLRP12P59046 1061 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 TFAMQ00059 246 aaKnown RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 CEBPZQ03701 1054 aaKnown RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 LRRC32Q14392 662 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 VEPH1Q14D04 833 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 L1TD1Q5T7N2 865 aaKnown RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 TRIM68Q6AZZ1 485 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 PRR23BQ6ZRT6 265 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 OSTM1Q86WC4 334 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 BRSK2Q8IWQ3 736 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 CMTM8Q8IZV2 173 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 THEM5Q8N1Q8 247 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 GPR161Q8N6U8 529 aaKnown RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 SPPL2BQ8TCT7 592 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 USP13Q92995 863 aaPredicted RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 SECISBP2LQ93073 1101 aaKnown RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 PKMYT1Q99640 499 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 FAM83CQ9BQN1 747 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 CBWD1Q9BRT8 395 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 PI4K2AQ9BTU6 479 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 GKN1Q9NS71 199 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 GMEB2Q9UKD1 530 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.57■□□□□ 0.56
CYTH3-205ENST00000466543 RALGAPA1Q6GYQ0 2036 aa18.57■□□□□ 0.56
CYTH3-205ENST00000466543 SDK1Q7Z5N4 2213 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 DCDC2BA2VCK2 349 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 GOLGA8IPA6NC78 632 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 GOLGA8JA6NMD2 632 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 EXTL3O43909 919 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 TADA3O75528 432 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 IL18RAPO95256 599 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 ITGB3P05106 788 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 ACAT1P24752 427 aaKnown RBP18.56■□□□□ 0.56
CYTH3-205ENST00000466543 LMNB2Q03252 620 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 PPP2R5DQ14738 602 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 SV2CQ496J9 727 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 RRAGBQ5VZM2 374 aa18.56■□□□□ 0.56
CYTH3-205ENST00000466543 NAIF1Q69YI7 327 aaPredicted RBP18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms