RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 TRIB1Q96RU8 372 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 MESP1Q9BRJ9 268 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 TTLL2Q9BWV7 592 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 STK31Q9BXU1 1019 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 MS4A7Q9GZW8 240 aaPredicted RBP5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 HESX1Q9UBX0 185 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 ZNF212Q9UDV6 495 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 ITGB1BP2Q9UKP3 347 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 PCDHGB2Q9Y5G2 931 aa5.25□□□□□ -1.57
CDC42BPA-211ENST00000466538 A0A087WV62 115 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 LOC100996750A0A140TA64 210 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 LOC102723971A0A1B0GUV8 181 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 GOLGA6L3A6NEY3 463 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 LEFTY2O00292 366 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 TRIM24O15164 1050 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 RASSF9O75901 435 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 MYL4P12829 197 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 IL1R1P14778 569 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 CNGB1Q14028 1251 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 SLC29A2Q14542 456 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 STARD3Q14849 445 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 SLC35G1Q2M3R5 365 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 C4orf46Q504U0 113 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 HSP90AB4PQ58FF6 505 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 USP17L6PQ6QN14 398 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 ZNF527Q8NB42 609 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 OR56A1Q8NGH5 318 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 SMCR8Q8TEV9 937 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 ZNF384Q8TF68 577 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 PPP1R9BQ96SB3 815 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 GDF15Q99988 308 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 TLR10Q9BXR5 811 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 KRTAP4-6Q9BYQ5 205 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 STK33Q9BYT3 514 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 CDC23Q9UJX2 597 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 CNOT11Q9UKZ1 510 aaKnown RBP5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 SHOC2Q9UQ13 582 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 USP15Q9Y4E8 981 aaPredicted RBP5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 RAD54BQ9Y620 910 aa5.24□□□□□ -1.57
CDC42BPA-211ENST00000466538 SPATA31A3Q5VYP0 1347 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 A0A1B0GTW7 788 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 TMEM233B4DJY2 109 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 KCNQ3O43525 872 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 A1BGP04217 495 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 HLA-DOAP06340 250 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 IDEP14735 1019 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 LRPAP1P30533 357 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 APOBEC3AP31941 199 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 HALP42357 657 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 GRM1Q13255 1194 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 MGAT5BQ3V5L5 792 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 ANO1Q5XXA6 986 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 ARMC6Q6NXE6 501 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 TAPT1Q6NXT6 567 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 Q6ZRM9 215 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 GDF7Q7Z4P5 450 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 KRT73Q86Y46 540 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 ZNF808Q8N4W9 903 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 CCDC150Q8NCX0 1101 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 NELL2Q99435 816 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 MAGEB5Q9BZ81 275 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 FAM83DQ9H4H8 585 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 EIF2B4Q9UI10 523 aaKnown RBP5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 HDAC9Q9UKV0 1011 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 MAGED2Q9UNF1 606 aaPredicted RBP5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 JAG2Q9Y219 1238 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 CDYLQ9Y232 598 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 MAN2B2Q9Y2E5 1009 aa5.23□□□□□ -1.57
CDC42BPA-211ENST00000466538 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 GAGE12BA1L429 117 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 GAGE12HA6NDE8 117 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 SKAP2O75563 359 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 GPANK1O95872 356 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 KCNA2P16389 499 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 ALDH9A1P49189 494 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 TOB1P50616 345 aaPredicted RBP5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 ANXA11P50995 505 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 SCNN1GP51170 649 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 COPAP53621 1224 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 RAPGEF1Q13905 1077 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 ARHGEF7Q14155 803 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 PUM3Q15397 648 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 NPY5RQ15761 445 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 TMEM95Q3KNT9 176 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 PLA1AQ53H76 456 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 TLDC1Q6P9B6 456 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 LAYNQ6UX15 382 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 ZDHHC24Q6UX98 284 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 TMPRSS9Q7Z410 1059 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 CLNKQ7Z7G1 428 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 MAPKAPK5Q8IW41 473 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 NKAPQ8N5F7 415 aaKnown RBP5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 ANKRD42Q8N9B4 389 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 Q8NA96 180 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 SPATA5Q8NB90 893 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 PPM1EQ8WY54 764 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 SNX27Q96L92 541 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 SLC46A1Q96NT5 459 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 NEU1Q99519 415 aa5.22□□□□□ -1.57
CDC42BPA-211ENST00000466538 AGO4Q9HCK5 861 aaKnown RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms