RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 RPL7AP62424 266 aaKnown RBP19.36■□□□□ 0.69
COL9A3-205ENST00000466192 PTPN11Q06124 597 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-205ENST00000466192 UBXN11Q5T124 520 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 ALS2CLQ60I27 953 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 EIF1ADQ8N9N8 165 aaKnown RBP19.36■□□□□ 0.69
COL9A3-205ENST00000466192 FEZF2Q8TBJ5 459 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 C18orf25Q96B23 403 aaPredicted RBP19.36■□□□□ 0.69
COL9A3-205ENST00000466192 TMEM176AQ96HP8 235 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 FAM204AQ9H8W3 233 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 TMEM51Q9NW97 253 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 CYTH4Q9UIA0 394 aa19.36■□□□□ 0.69
COL9A3-205ENST00000466192 MED7O43513 233 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 HSPA6P17066 643 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 CACNB2Q08289 660 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-205ENST00000466192 INCA1Q0VD86 236 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 NBPF20Q3BBV1 942 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 SLC13A5Q86YT5 568 aaPredicted RBP19.35■□□□□ 0.69
COL9A3-205ENST00000466192 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP19.35■□□□□ 0.69
COL9A3-205ENST00000466192 ZIM3Q96PE6 472 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 RUFY1Q96T51 708 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 LHX5Q9H2C1 402 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 CNTN3Q9P232 1028 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 CEP83Q9Y592 693 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 CEP350Q5VT06 3117 aa19.35■□□□□ 0.69
COL9A3-205ENST00000466192 SEPT4O43236 478 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 PHF2O75151 1096 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 TAF2Q6P1X5 1199 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 ERICH1Q86X53 443 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 MREGQ8N565 214 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 MAGOHBQ96A72 148 aaKnown RBP19.34■□□□□ 0.69
COL9A3-205ENST00000466192 RNF39Q9H2S5 420 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 GTF2IRD1Q9UHL9 959 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 BARX2Q9UMQ3 279 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-205ENST00000466192 TMEM191CA6NGB0 347 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 O00370 1275 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 NDST1P52848 882 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 MYO1EQ12965 1108 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 PTPN20Q4JDL3 420 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 CYP4A22Q5TCH4 519 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 GDF6Q6KF10 455 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-205ENST00000466192 GOLGA6L1Q8N7Z2 621 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 SEC14L1Q92503 715 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 RAB17Q9H0T7 212 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 KLK14Q9P0G3 267 aa19.34■□□□□ 0.69
COL9A3-205ENST00000466192 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.34■□□□□ 0.69
COL9A3-205ENST00000466192 RARBP10826 455 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 CHRNA3P32297 505 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 TAS2R40P59535 323 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 PPP1R15BQ5SWA1 713 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 CFAP58Q5T655 872 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 FAM228AQ86W67 206 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.33■□□□□ 0.69
COL9A3-205ENST00000466192 EXOC4Q96A65 974 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 DDX27Q96GQ7 796 aaKnown RBP19.33■□□□□ 0.69
COL9A3-205ENST00000466192 TJP2Q9UDY2 1190 aa19.33■□□□□ 0.69
COL9A3-205ENST00000466192 ADAMTS4O75173 837 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 FLT3P36888 993 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 ZNF252P-AS1Q0IIN9 211 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 NOGQ13253 232 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 DHX34Q14147 1143 aaKnown RBP19.33■□□□□ 0.68
COL9A3-205ENST00000466192 DNAJC24Q6P3W2 148 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 TTC27Q6P3X3 843 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 CCDC137Q6PK04 289 aaKnown RBP19.33■□□□□ 0.68
COL9A3-205ENST00000466192 JAMLQ86YT9 394 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 IQCKQ8N0W5 287 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 BEST2Q8NFU1 509 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 WNT8BQ93098 351 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 SH3GL2Q99962 352 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 ERP44Q9BS26 406 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 PLVAPQ9BX97 442 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 SPC25Q9HBM1 224 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 FAM114A2Q9NRY5 505 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 MTUS1Q9ULD2 1270 aa19.33■□□□□ 0.68
COL9A3-205ENST00000466192 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.33■□□□□ 0.68
COL9A3-205ENST00000466192 MICAL2O94851 1124 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 RARAP10276 462 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 CCND3P30281 292 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 HSPA9P38646 679 aaKnown RBP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 NKX3-2P78367 333 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 MRPS6P82932 125 aaKnown RBP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 SIX1Q15475 284 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 PIK3R5Q8WYR1 880 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 HEXIM2Q96MH2 286 aaKnown RBP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 MCEEQ96PE7 176 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 IP6K2Q9UHH9 426 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 USTQ9Y2C2 406 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 IPPQ9Y573 584 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 SNX9Q9Y5X1 595 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 SMIM28A0A1B0GU29 152 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 KRT14P02533 472 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 VDRP11473 427 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 LMAN1P49257 510 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 OGDHQ02218 1023 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 C9orf57Q5W0N0 161 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 SMG8Q8ND04 991 aaKnown RBP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 C3orf20Q8ND61 904 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 CPXM1Q96SM3 734 aa19.32■□□□□ 0.68
COL9A3-205ENST00000466192 FAM124BQ9H5Z6 455 aaPredicted RBP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.32■□□□□ 0.68
COL9A3-205ENST00000466192 RNF186Q9NXI6 227 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms