RNA–Protein interactions for RNA: ENST00000465950.5

SCAF11-205, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 5,296 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-205ENST00000465950 FDXACB1Q9BRP7 624 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 NIFKQ9BYG3 293 aaKnown RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 GPR63Q9BZJ6 419 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 FAM107BQ9H098 131 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 PARVAQ9NVD7 372 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 SLC12A8A0AV02 714 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 LRRD1A4D1F6 860 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 PSMD12O00232 456 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 HMBSP08397 361 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 FSHRP23945 695 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 ADCY8P40145 1251 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 P3H1Q32P28 736 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 HEATR6Q6AI08 1181 aaKnown RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 SERPINA13PQ6UXR4 307 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 CCDC186Q7Z3E2 898 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 IFT20Q8IY31 132 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 PHACTR4Q8IZ21 702 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 DNAJC12Q9UKB3 198 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 SLC39A10Q9ULF5 831 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 ZNF711Q9Y462 761 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 C3orf70A6NLC5 250 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 POTECB2RU33 542 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 RHBDL3P58872 404 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 TUSC3Q13454 348 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 ZDHHC17Q8IUH5 632 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 GUF1Q8N442 669 aaKnown RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 TTC8Q8TAM2 541 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 SPATA18Q8TC71 538 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 HLA-CQ95604 372 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 PAIP2Q9BPZ3 127 aaKnown RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 ADGRE3Q9BY15 652 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 NDFIP2Q9NV92 336 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 DERAQ9Y315 318 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 MIF4GDA9UHW6 222 aaKnown RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 CREB3O43889 395 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 PLA2G4AP47712 749 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 CDH8P55286 799 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 SCRN1Q12765 414 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 LY6KQ17RY6 165 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 POTEDQ86YR6 584 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 HJURPQ8NCD3 748 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 LZICQ8WZA0 190 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 TUBGCP2Q9BSJ2 902 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 ALDH8A1Q9H2A2 487 aaPredicted RBP9.93□□□□□ -0.82
SCAF11-205ENST00000465950 NSMCE4AQ9NXX6 385 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 SENP1Q9P0U3 644 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 CD207Q9UJ71 328 aa9.93□□□□□ -0.82
SCAF11-205ENST00000465950 IGF2BP3O00425 579 aaKnown RBP eCLIP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SPTLC1O15269 473 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 VTNP04004 478 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 YBX3P16989 372 aaKnown RBP eCLIP9.92□□□□□ -0.821e-7■□□□□ 9.9
SCAF11-205ENST00000465950 CYP2C18P33260 490 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SETDB1Q15047 1291 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 TCEA2Q15560 299 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 PRPF38BQ5VTL8 546 aaKnown RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 CHRDL2Q6WN34 429 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 PALB2Q86YC2 1186 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 WDR49Q8IV35 697 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 PPHLN1Q8NEY8 458 aaKnown RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 MAGEC3Q8TD91 643 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 OTUD7AQ8TE49 926 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 TMEM265A0A087WTH1 108 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 NEMP2A6NFY4 417 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 PRR5-ARHGAP8B1AHC4 643 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SGK1O00141 431 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 GPC4O75487 556 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SMPD1P17405 629 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 ARRB1P49407 418 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 GAD2Q05329 585 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 AASDHQ4L235 1098 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SH2D4BQ5SQS7 431 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 MOB2Q70IA6 237 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 DNAJC7Q99615 494 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 RTP3Q9BQQ7 232 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 PPLO60437 1756 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 C10orf71Q711Q0 1435 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 CACNB4O00305 520 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 BUB1O43683 1085 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SYN1P17600 705 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 SARSP49591 514 aaKnown RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 AP2B1P63010 937 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 COASYQ13057 564 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 RBBP5Q15291 538 aaKnown RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 FBXL19Q6PCT2 694 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 ATOH1Q92858 354 aaPredicted RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 TSPAN17Q96FV3 270 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 TRMT61BQ9BVS5 477 aaKnown RBP9.92□□□□□ -0.82
SCAF11-205ENST00000465950 CCSER1Q9C0I3 900 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 DNAJC25Q9H1X3 360 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 TMEM134Q9H6X4 195 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 BCL2L12Q9HB09 334 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 TLR9Q9NR96 1032 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 HSPBP1Q9NZL4 362 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 FAM198AQ9UFP1 575 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 DNMT3LQ9UJW3 386 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 PCDHB2Q9Y5E7 798 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 CCDC189A1A4V9 331 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 FAM47DPA6NHR8 397 aa9.92□□□□□ -0.82
SCAF11-205ENST00000465950 RASGRF2O14827 1237 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms