RNA–Protein interactions for RNA: ENST00000465563.5

SMC4-205, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 747 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-205ENST00000465563 NXPH3O95157 252 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 NDUFB7P17568 137 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 CHRM3P20309 590 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 PRDX5P30044 214 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 PHKA1P46020 1223 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 EIF2B5Q13144 721 aaKnown RBP6.64□□□□□ -1.35
SMC4-205ENST00000465563 PTPN21Q16825 1174 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 MTX3Q5HYI7 312 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 THEMIS2Q5TEJ8 643 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 MIER2Q8N344 545 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 ATRIPQ8WXE1 791 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 C1orf43Q9BWL3 253 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 SLC13A1Q9BZW2 595 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 ARHGEF3Q9NR81 526 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 AGAP1Q9UPQ3 857 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 ZNF804BA4D1E1 1349 aa6.64□□□□□ -1.35
SMC4-205ENST00000465563 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
SMC4-205ENST00000465563 KIF20AO95235 890 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 FAM163BP0C2L3 166 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 TCF15Q12870 199 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 ODF1Q14990 250 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 TEDDM1Q5T9Z0 273 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 RNF187Q5TA31 235 aaPredicted RBP6.63□□□□□ -1.35
SMC4-205ENST00000465563 CEP85Q6P2H3 762 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 ZNF782Q6ZMW2 699 aaPredicted RBP6.63□□□□□ -1.35
SMC4-205ENST00000465563 FAM90A1Q86YD7 464 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 SEMA4CQ9C0C4 833 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 TINAGL1Q9GZM7 467 aaPredicted RBP6.63□□□□□ -1.35
SMC4-205ENST00000465563 WDCPQ9H6R7 721 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 SERGEFQ9UGK8 458 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 PCDHA3Q9Y5H8 950 aa6.63□□□□□ -1.35
SMC4-205ENST00000465563 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 GNAI2P04899 355 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 PRR35P0CG20 571 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 CCND1P24385 295 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 SSBP2P81877 361 aaPredicted RBP6.62□□□□□ -1.35
SMC4-205ENST00000465563 PPP1R32Q7Z5V6 425 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 USP37Q86T82 979 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 FAM109AQ8N4B1 249 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 KLHDC4Q8TBB5 520 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 DDX17Q92841 729 aaKnown RBP6.62□□□□□ -1.35
SMC4-205ENST00000465563 TNPO1Q92973 898 aaKnown RBP6.62□□□□□ -1.35
SMC4-205ENST00000465563 NELL2Q99435 816 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 ZDHHC8Q9ULC8 765 aa6.62□□□□□ -1.35
SMC4-205ENST00000465563 SLC16A6O15403 523 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 JTBO76095 146 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 JUPP14923 745 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 PCSK6P29122 969 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 GCLCP48506 637 aaPredicted RBP6.61□□□□□ -1.35
SMC4-205ENST00000465563 ALDH9A1P49189 494 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 CDKN1CP49918 316 aaPredicted RBP6.61□□□□□ -1.35
SMC4-205ENST00000465563 FAM50AQ14320 339 aaKnown RBP6.61□□□□□ -1.35
SMC4-205ENST00000465563 SLC44A4Q53GD3 710 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 ZNF618Q5T7W0 954 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 VPS53Q5VIR6 699 aa6.61□□□□□ -1.35
SMC4-205ENST00000465563 Q8N9P0 234 aaPredicted RBP6.61□□□□□ -1.35
SMC4-205ENST00000465563 TNKSO95271 1327 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 ALG1L2C9J202 215 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 PROB1E7EW31 1015 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 KELP23276 732 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 TOB1P50616 345 aaPredicted RBP6.6□□□□□ -1.35
SMC4-205ENST00000465563 NOGQ13253 232 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 ZNF626Q68DY1 528 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 SLC29A4Q7RTT9 530 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 HEATR3Q7Z4Q2 680 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 ZNF366Q8N895 744 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 TBC1D5Q92609 795 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 MRPL46Q9H2W6 279 aaKnown RBP6.6□□□□□ -1.35
SMC4-205ENST00000465563 SH3BP4Q9P0V3 963 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 ABCF2Q9UG63 623 aa6.6□□□□□ -1.35
SMC4-205ENST00000465563 FEZ2Q9UHY8 353 aaPredicted RBP6.6□□□□□ -1.35
SMC4-205ENST00000465563 PPM1DO15297 605 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 DTNBO60941 627 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 ZRANB2O95218 330 aaKnown RBP eCLIP6.59□□□□□ -1.35
SMC4-205ENST00000465563 LATS1O95835 1130 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 CERS1P27544 350 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 HK3P52790 923 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 SFRP4Q6FHJ7 346 aaPredicted RBP6.59□□□□□ -1.35
SMC4-205ENST00000465563 ANKRD16Q6P6B7 361 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 BHLHA9Q7RTU4 235 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 DTX2Q86UW9 622 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 CPA6Q8N4T0 437 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 PRPF38AQ8NAV1 312 aaKnown RBP6.59□□□□□ -1.35
SMC4-205ENST00000465563 FANCBQ8NB91 859 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 RGMAQ96B86 450 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 NRIP3Q9NQ35 241 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 SERHLQ9NQF3 203 aa6.59□□□□□ -1.35
SMC4-205ENST00000465563 M0QYG6 137 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 PDHA1P08559 390 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 PDCP20941 246 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 EPHB2P29323 1055 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 PROSER3Q2NL68 480 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 AARS2Q5JTZ9 985 aaKnown RBP6.58□□□□□ -1.36
SMC4-205ENST00000465563 FAM160B1Q5W0V3 765 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 TMEM108Q6UXF1 575 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 ZNF804AQ7Z570 1209 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 REPS1Q96D71 796 aa6.58□□□□□ -1.36
SMC4-205ENST00000465563 ST6GALNAC1Q9NSC7 600 aaPredicted RBP6.58□□□□□ -1.36
SMC4-205ENST00000465563 QSOX1O00391 747 aa6.57□□□□□ -1.36
SMC4-205ENST00000465563 TLR5O60602 858 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms