RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 NME7Q9Y5B8 376 aa21.77■■□□□ 1.08
SKA3-205ENST00000465471 HCRTO43612 131 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 LRRN2O75325 713 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 MTHFRP42898 656 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 ASPAP45381 313 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 NOP14P78316 857 aaKnown RBP21.76■■□□□ 1.07
SKA3-205ENST00000465471 STX1AQ16623 288 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 INTS6LQ5JSJ4 861 aaKnown RBP21.76■■□□□ 1.07
SKA3-205ENST00000465471 SPOPLQ6IQ16 392 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 SASS6Q6UVJ0 657 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 CNOT6LQ96LI5 555 aaKnown RBP21.76■■□□□ 1.07
SKA3-205ENST00000465471 RIPOR3Q96MK2 946 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 NECTIN4Q96NY8 510 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 PI4K2AQ9BTU6 479 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 BCO2Q9BYV7 579 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 CRISPLD1Q9H336 500 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 SMYD3Q9H7B4 428 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 RAB20Q9NX57 234 aa21.76■■□□□ 1.07
SKA3-205ENST00000465471 SPDYE4A6NLX3 237 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 CCDC192P0DO97 292 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 PCSK1P29120 753 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 FMO5P49326 533 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 TSPY1Q01534 308 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 SMARCB1Q12824 385 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 SLC39A12Q504Y0 691 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 PPM1LQ5SGD2 360 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 DCP1BQ8IZD4 617 aaKnown RBP21.75■■□□□ 1.07
SKA3-205ENST00000465471 C2orf15Q8WU43 125 aaKnown RBP21.75■■□□□ 1.07
SKA3-205ENST00000465471 FAXDC2Q96IV6 333 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 PGLYRP2Q96PD5 576 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 IMPG2Q9BZV3 1241 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 SDCBP2Q9H190 292 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 THAP9Q9H5L6 903 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 CYP4F11Q9HBI6 524 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 TMLHEQ9NVH6 421 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 ANO10Q9NW15 660 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 PRKAG3Q9UGI9 489 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 INSL5Q9Y5Q6 135 aa21.75■■□□□ 1.07
SKA3-205ENST00000465471 WEE2P0C1S8 567 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 P4HA1P13674 534 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 ACAT1P24752 427 aaKnown RBP21.74■■□□□ 1.07
SKA3-205ENST00000465471 LMO2P25791 158 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 ELF1P32519 619 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 ATAT1Q5SQI0 421 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 FAM171BQ6P995 826 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 C11orf57Q6ZUT1 292 aaPredicted RBP21.74■■□□□ 1.07
SKA3-205ENST00000465471 ATAD1Q8NBU5 361 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 ENOX1Q8TC92 643 aaKnown RBP21.74■■□□□ 1.07
SKA3-205ENST00000465471 SMG7Q92540 1137 aaKnown RBP21.74■■□□□ 1.07
SKA3-205ENST00000465471 POMKQ9H5K3 350 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 CDH9Q9ULB4 789 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 PTPRDP23468 1912 aa21.74■■□□□ 1.07
SKA3-205ENST00000465471 PRRG1O14668 218 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 P4HA2O15460 535 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 N4BP1O75113 896 aaKnown RBP21.73■■□□□ 1.07
SKA3-205ENST00000465471 CDH8P55286 799 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 TYRO3Q06418 890 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 CCDC142Q17RM4 750 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 SCARA5Q6ZMJ2 495 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 SPPL2BQ8TCT7 592 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 ADAMTS19Q8TE59 1207 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 SYT15Q9BQS2 421 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 PHF7Q9BWX1 381 aaPredicted RBP21.73■■□□□ 1.07
SKA3-205ENST00000465471 NIF3L1Q9GZT8 377 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 CRTAC1Q9NQ79 661 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 YIPF1Q9Y548 306 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 UTP18Q9Y5J1 556 aaKnown RBP eCLIP21.73■■□□□ 1.07
SKA3-205ENST00000465471 TTC28Q96AY4 2481 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 DOCK6Q96HP0 2047 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 NOTCH4Q99466 2003 aa21.73■■□□□ 1.07
SKA3-205ENST00000465471 CCL16O15467 120 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 GNL1P36915 607 aaPredicted RBP21.72■■□□□ 1.07
SKA3-205ENST00000465471 RAP1GAPP47736 663 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 ZP2Q05996 745 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 INCA1Q0VD86 236 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 KCNH2Q12809 1159 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 DUSP4Q13115 394 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 NFE2Q16621 373 aaPredicted RBP21.72■■□□□ 1.07
SKA3-205ENST00000465471 ADHFE1Q8IWW8 467 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 TTC9BQ8N6N2 239 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 SNX25Q9H3E2 840 aa21.72■■□□□ 1.07
SKA3-205ENST00000465471 WDR6Q9NNW5 1121 aaKnown RBP21.72■■□□□ 1.07
SKA3-205ENST00000465471 MYBPHLA2RUH7 354 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 C19orf67A6NJJ6 358 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 ATP2C2O75185 946 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 XYLBO75191 536 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 AFPP02771 609 aaKnown RBP21.71■■□□□ 1.07
SKA3-205ENST00000465471 TPD52L1Q16890 204 aaPredicted RBP21.71■■□□□ 1.07
SKA3-205ENST00000465471 CCDC150Q8NCX0 1101 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 OR6B3Q8NGW1 331 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 LMO3Q8TAP4 145 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 FUCA2Q9BTY2 467 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 CYP3A43Q9HB55 503 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 ABCB6Q9NP58 842 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 GTF3C4Q9UKN8 822 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 NCOR1O75376 2440 aa21.71■■□□□ 1.07
SKA3-205ENST00000465471 LRG1P02750 347 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 PDGFRBP09619 1106 aa21.7■■□□□ 1.06
SKA3-205ENST00000465471 PSMC1P62191 440 aaKnown RBP21.7■■□□□ 1.06
SKA3-205ENST00000465471 CFAP221Q4G0U5 840 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms