RNA–Protein interactions for RNA: ENST00000465421.5

SIK3-207, Transcript of SIK family kinase 3, humanhuman

TSL 2

Gene SIK3, Length 3,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-207ENST00000465421 DCTN4Q9UJW0 460 aa6.82□□□□□ -1.32
SIK3-207ENST00000465421 PPM1HQ9ULR3 514 aa6.82□□□□□ -1.32
SIK3-207ENST00000465421 MYH11P35749 1972 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PFDN1O60925 122 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PIAS1O75925 651 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 IL1BP01584 269 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TROVE2P10155 538 aaKnown RBP eCLIP6.81□□□□□ -1.32
SIK3-207ENST00000465421 RFX1P22670 979 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CA4P22748 312 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PSMC2P35998 433 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 PGM1P36871 562 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CYP2J2P51589 502 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 OVGP1Q12889 678 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 KLF1Q13351 362 aaPredicted RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 TRMT5Q32P41 509 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 MFSD14BQ5SR56 506 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 UGT2A3Q6UWM9 527 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PCGF5Q86SE9 256 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 FAM186BQ8IYM0 893 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 GRK7Q8WTQ7 553 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 MZB1Q8WU39 189 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 MKNK1Q9BUB5 465 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP29Q9HBJ7 922 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 DDX4Q9NQI0 724 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 NOCTQ9UK39 431 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 CHMP2BQ9UQN3 213 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 R3HDM2Q9Y2K5 976 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 NFASCO94856 1347 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PNMA6FA0A0J9YX94 578 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 WDR91A4D1P6 747 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 RSPH10B2B2RC85 870 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TM7SF2O76062 418 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 GCNT3O95395 438 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 RSPH10BP0C881 870 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TRIM49P0CI25 452 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TRIM49CP0CI26 452 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 SPATA31C1P0DKV0 1188 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CDK4P11802 303 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 GZMAP12544 262 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 UQCRBP14927 111 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 ADRA1DP25100 572 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 ADCY8P40145 1251 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PIK3CAP42336 1068 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 RPL26P61254 145 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 TGFB2P61812 414 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PHEXP78562 749 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PTK7Q13308 1070 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CYP4F22Q6NT55 531 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TATDN1Q6P1N9 297 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 KLC3Q6P597 504 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TTC7BQ86TV6 843 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 LRRC6Q86X45 466 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CATSPER3Q86XQ3 398 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TMPRSS6Q8IU80 811 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 ZBTB8BQ8NAP8 495 aaPredicted RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 OR6Y1Q8NGX8 325 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 ZNF564Q8TBZ8 553 aaPredicted RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 DIS3LQ8TF46 1054 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 DCAF4Q8WV16 495 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 NMD3Q96D46 503 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 DNAJC1Q96KC8 554 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 CFAP57Q96MR6 1250 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CATSPER2Q96P56 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 RBM15Q96T37 977 aaKnown RBP eCLIP6.81□□□□□ -1.32
SIK3-207ENST00000465421 NUP85Q9BW27 656 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 TMEM120AQ9BXJ8 343 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 FOXP3Q9BZS1 431 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 GLT8D2Q9H1C3 349 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 ACP6Q9NPH0 428 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 NDE1Q9NXR1 346 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CLIC5Q9NZA1 410 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 MTO1Q9Y2Z2 717 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L15C9J2P7 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L13C9JLJ4 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L11C9JVI0 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L18D6R9N7 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L22D6RA61 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L17D6RBQ6 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L19D6RCP7 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L20D6RJB6 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CHMP2AO43633 222 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PPP1R11O60927 126 aaPredicted RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP1O94782 785 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 ESRRAP11474 423 aaPredicted RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 VARSP26640 1264 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 AP2B1P63010 937 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L24Q0WX57 530 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 PRKD1Q15139 912 aaPredicted RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 CLEC16AQ2KHT3 1053 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 SFT2D3Q587I9 215 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 GPATCH4Q5T3I0 446 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 PCNX4Q63HM2 1172 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 APOBEC3HQ6NTF7 200 aaKnown RBP6.81□□□□□ -1.32
SIK3-207ENST00000465421 USP17L6PQ6QN14 398 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 ARHGAP24Q8N264 748 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 BBOF1Q8ND07 529 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 FAM172AQ8WUF8 416 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 GAB3Q8WWW8 586 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 CCDC17Q96LX7 622 aa6.81□□□□□ -1.32
SIK3-207ENST00000465421 VPS11Q9H270 941 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms