RNA–Protein interactions for RNA: ENST00000465415.1

CNKSR1-203, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 2

Gene CNKSR1, Length 624 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-203ENST00000465415 KLHL10Q6JEL2 608 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 SV2AQ7L0J3 742 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 LIMS2Q7Z4I7 341 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 OSTM1Q86WC4 334 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 SPPL2BQ8TCT7 592 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 KBTBD7Q8WVZ9 684 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 DHTKD1Q96HY7 919 aaPredicted RBP13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 SEPT5Q99719 369 aaPredicted RBP13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 ACBD6Q9BR61 282 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 CORO1BQ9BR76 489 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 EPHX3Q9H6B9 360 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 ABI2Q9NYB9 513 aaPredicted RBP13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 HSFX1Q9UBD0 423 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 NXF1Q9UBU9 619 aaKnown RBP13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 SLC27A5Q9Y2P5 690 aa13.46□□□□□ -0.25
CNKSR1-203ENST00000465415 HCRTO43612 131 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 SOAT2O75908 522 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 VNN1O95497 513 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 ASGR2P07307 311 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 PTPN2P17706 415 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 WARSP23381 471 aaKnown RBP13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 GCLMP48507 274 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 CDR1P51861 262 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 EPHB3P54753 998 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 NFE2Q16621 373 aaPredicted RBP13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 MGAT5BQ3V5L5 792 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 ZNF667Q5HYK9 610 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 PDZD4Q76G19 769 aaPredicted RBP13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 LRRTM3Q86VH5 581 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 ZC3H3Q8IXZ2 948 aaKnown RBP13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 TRIML1Q8N9V2 468 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 ITFG1Q8TB96 612 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 ZNF512Q96ME7 567 aaPredicted RBP13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 SYT15Q9BQS2 421 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 C1QTNF1Q9BXJ1 281 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 SNX25Q9H3E2 840 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 CLSTN2Q9H4D0 955 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 MMRN2Q9H8L6 949 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 VRTNQ9H8Y1 702 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 ASAH2Q9NR71 780 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 CEP72Q9P209 647 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 KIAA1468Q9P260 1216 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 EPS15L1Q9UBC2 864 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 LIMD1Q9UGP4 676 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 CDH7Q9ULB5 785 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 CTNND2Q9UQB3 1225 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 MRPS23Q9Y3D9 190 aaKnown RBP13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 PCDHB5Q9Y5E4 795 aa13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 ZFP37Q9Y6Q3 630 aaPredicted RBP13.45□□□□□ -0.26
CNKSR1-203ENST00000465415 BICDL2A1A5D9 508 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 PPP1R3GB7ZBB8 358 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 TACC1O75410 805 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 HLA-DRAP01903 254 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 LAMP2P13473 410 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 P4HA1P13674 534 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 TUFMP49411 452 aaKnown RBP13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 PPP3CAQ08209 521 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 MTMR3Q13615 1198 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 VEPH1Q14D04 833 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 SLC5A9Q2M3M2 681 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 DCAF17Q5H9S7 520 aaPredicted RBP13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 SCARA5Q6ZMJ2 495 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 LEMD2Q8NC56 503 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 OR6B3Q8NGW1 331 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 NELFBQ8WX92 580 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 ING5Q8WYH8 240 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 TAF4BQ92750 862 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 FGF13Q92913 245 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 FAM122AQ96E09 287 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 MRPL45Q9BRJ2 306 aaKnown RBP13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 IMPG2Q9BZV3 1241 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 SMYD3Q9H7B4 428 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 TMEM8AQ9HCN3 771 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 AVENQ9NQS1 362 aaPredicted RBP13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 LMBRD1Q9NUN5 540 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 TMLHEQ9NVH6 421 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 GTF3C4Q9UKN8 822 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 CDH9Q9ULB4 789 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 SORCS3Q9UPU3 1222 aa13.44□□□□□ -0.26
CNKSR1-203ENST00000465415 FAM86C2PA6NEL3 165 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 GOLGA6L22H0YM25 854 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 ZNF197O14709 1029 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 STX10O60499 249 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 ASS1P00966 412 aaKnown RBP13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 HAPLN1P10915 354 aaPredicted RBP13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 MYL4P12829 197 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 CEBPBP17676 345 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 ATF6P18850 670 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 LMO2P25791 158 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 GTF2H1P32780 548 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 PLA2G5P39877 138 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 MXI1P50539 228 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 PSMC1P62191 440 aaKnown RBP13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 ZXDAP98168 799 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 PAK1Q13153 545 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 MAPRE1Q15691 268 aaKnown RBP13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 CCDC142Q17RM4 750 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 SGSM1Q2NKQ1 1148 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 CYP4A22Q5TCH4 519 aa13.43□□□□□ -0.26
CNKSR1-203ENST00000465415 TCERG1LQ5VWI1 586 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms