RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 TUFMP49411 452 aaKnown RBP13.09□□□□□ -0.31
XRN1-204ENST00000465074 VEPH1Q14D04 833 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 IER5LQ5T953 404 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 TMEM86AQ8N2M4 240 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 ZNF516Q92618 1163 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 NXF1Q9UBU9 619 aaKnown RBP13.09□□□□□ -0.31
XRN1-204ENST00000465074 GTF3C4Q9UKN8 822 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 PCDHB5Q9Y5E4 795 aa13.09□□□□□ -0.31
XRN1-204ENST00000465074 PDXKO00764 312 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 NRG2O14511 850 aaPredicted RBP13.08□□□□□ -0.32
XRN1-204ENST00000465074 ATP2C2O75185 946 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 RHOBTB3O94955 611 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 KIF20AO95235 890 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 AVPR2P30518 371 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 TNNC1P63316 161 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 GPC5P78333 572 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 TEAD2Q15562 447 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 SOWAHAQ2M3V2 549 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 FAM78AQ5JUQ0 283 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 PRSS36Q5K4E3 855 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 TANGO2Q6ICL3 276 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 DNAJB7Q7Z6W7 309 aaPredicted RBP13.08□□□□□ -0.32
XRN1-204ENST00000465074 OSTM1Q86WC4 334 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 C12orf56Q8IXR9 622 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 SMYD4Q8IYR2 804 aaPredicted RBP13.08□□□□□ -0.32
XRN1-204ENST00000465074 STKLD1Q8NE28 680 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 CXorf38Q8TB03 319 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 ERCC4Q92889 916 aaPredicted RBP13.08□□□□□ -0.32
XRN1-204ENST00000465074 ELMO3Q96BJ8 720 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 ZSWIM3Q96MP5 696 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 PLA2G2FQ9BZM2 168 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 DNAJC25Q9H1X3 360 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 SNX25Q9H3E2 840 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 KCTD10Q9H3F6 313 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 ATXN3LQ9H3M9 355 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.08□□□□□ -0.32
XRN1-204ENST00000465074 TMLHEQ9NVH6 421 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 GDAP2Q9NXN4 497 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 GDE1Q9NZC3 331 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 MAGED2Q9UNF1 606 aaPredicted RBP13.08□□□□□ -0.32
XRN1-204ENST00000465074 FRMD4BQ9Y2L6 1034 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 KMT2EQ8IZD2 1858 aa13.08□□□□□ -0.32
XRN1-204ENST00000465074 HAPLN1P10915 354 aaPredicted RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 GABRR2P28476 465 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 LHX1P48742 406 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 GPR15P49685 360 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 MYL6P60660 151 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 PSMC1P62191 440 aaKnown RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 GRM2Q14416 872 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 CCDC142Q17RM4 750 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 WDR72Q3MJ13 1102 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 SDHAF4Q5VUM1 108 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 ASTLQ6HA08 431 aaPredicted RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 ITIH5Q86UX2 942 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 SPATA2LQ8IUW3 424 aaPredicted RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 SCN4BQ8IWT1 228 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 FMR1NBQ8N0W7 255 aaPredicted RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 TOP6BLQ8N6T0 577 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 LEMD2Q8NC56 503 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 OR6B3Q8NGW1 331 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 SHKBP1Q8TBC3 707 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 ZSCAN18Q8TBC5 510 aaPredicted RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 SPPL2BQ8TCT7 592 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 PLEKHO2Q8TD55 490 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 C2orf15Q8WU43 125 aaKnown RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 ACBD6Q9BR61 282 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 MMRN2Q9H8L6 949 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 ZFP14Q9HCL3 533 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 ZNF334Q9HCZ1 680 aaPredicted RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 AVENQ9NQS1 362 aaPredicted RBP13.07□□□□□ -0.32
XRN1-204ENST00000465074 ASB3Q9Y575 518 aa13.07□□□□□ -0.32
XRN1-204ENST00000465074 KRBA1A5PL33 1030 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 LRRIQ3A6PVS8 624 aaPredicted RBP13.06□□□□□ -0.32
XRN1-204ENST00000465074 SMC2O95347 1197 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 ATF6P18850 670 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 NR2F2P24468 414 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 CYP2F1P24903 491 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 LMO2P25791 158 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 PCSK1P29120 753 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 GNL1P36915 607 aaPredicted RBP13.06□□□□□ -0.32
XRN1-204ENST00000465074 VIPR2P41587 438 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 DLG4P78352 724 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 CYP27A1Q02318 531 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 FAM160A1Q05DH4 1040 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 SNW1Q13573 536 aaKnown RBP13.06□□□□□ -0.32
XRN1-204ENST00000465074 NFE2Q16621 373 aaPredicted RBP13.06□□□□□ -0.32
XRN1-204ENST00000465074 DDR2Q16832 855 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 INTS6LQ5JSJ4 861 aaKnown RBP13.06□□□□□ -0.32
XRN1-204ENST00000465074 STXBP5Q5T5C0 1151 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 SCARA5Q6ZMJ2 495 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 TMEM105Q8N8V8 129 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 PARD3BQ8TEW8 1205 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 PSMG2Q969U7 264 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 EEF2KMTQ96G04 330 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 GCNAQ96QF7 691 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 SYT15Q9BQS2 421 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 MRPL45Q9BRJ2 306 aaKnown RBP13.06□□□□□ -0.32
XRN1-204ENST00000465074 DMAC2Q9NW81 257 aa13.06□□□□□ -0.32
XRN1-204ENST00000465074 RMND1Q9NWS8 449 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms