RNA–Protein interactions for RNA: ENST00000464275.5

PDLIM2-216, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 1,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-216ENST00000464275 RRP15Q9Y3B9 282 aaKnown RBP23.03■■□□□ 1.28
PDLIM2-216ENST00000464275 TMEM191CA6NGB0 347 aa23.02■■□□□ 1.28
PDLIM2-216ENST00000464275 MYO1EQ12965 1108 aa23.02■■□□□ 1.28
PDLIM2-216ENST00000464275 IQCKQ8N0W5 287 aa23.02■■□□□ 1.28
PDLIM2-216ENST00000464275 DDX27Q96GQ7 796 aaKnown RBP23.02■■□□□ 1.28
PDLIM2-216ENST00000464275 PCYOX1Q9UHG3 505 aa23.02■■□□□ 1.28
PDLIM2-216ENST00000464275 RASAL2Q9UJF2 1139 aa23.02■■□□□ 1.28
PDLIM2-216ENST00000464275 VDRP11473 427 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 ECHS1P30084 290 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 CRYBB1P53674 252 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 FCGRTP55899 365 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 ZNF200P98182 395 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 INCA1Q0VD86 236 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 EMC10Q5UCC4 262 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 ZDHHC14Q8IZN3 488 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 C7orf31Q8N865 590 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 TSEN2Q8NCE0 465 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 TRPV1Q8NER1 839 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 TWNKQ96RR1 684 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 TRIM6Q9C030 488 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 BARX2Q9UMQ3 279 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 DCAF8L1A6NGE4 600 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 SIX1Q15475 284 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 DDX42Q86XP3 938 aaKnown RBP eCLIP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 C12orf50Q8NA57 414 aaPredicted RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 C3orf20Q8ND61 904 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 BEST2Q8NFU1 509 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 CAPS2Q9BXY5 557 aa23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 ABT1Q9ULW3 272 aaKnown RBP23.01■■□□□ 1.27
PDLIM2-216ENST00000464275 DAPK3O43293 454 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 GJB6O95452 261 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 RARAP10276 462 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 PTGIRP43119 386 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 ZBTB6Q15916 424 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 PPP1R15BQ5SWA1 713 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 MFSD14CQ5VZR4 134 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 JAMLQ86YT9 394 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 ERP44Q9BS26 406 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 TRIM51Q9BSJ1 452 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 CNTN3Q9P232 1028 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 HMGXB4Q9UGU5 601 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 TCRBV7S2A1N4TA0A589 114 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 MYO1CO00159 1063 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 HSPA9P38646 679 aaKnown RBP23■■□□□ 1.27
PDLIM2-216ENST00000464275 GJA9P57773 515 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 TAS2R40P59535 323 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 RPL7AP62424 266 aaKnown RBP23■■□□□ 1.27
PDLIM2-216ENST00000464275 DUPD1Q68J44 220 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 DCUN1D2Q6PH85 259 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 ALKAL1Q6UXT8 129 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 KATNAL2Q8IYT4 538 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 TMEM40Q8WWA1 233 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 C18orf8Q96DM3 657 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 ZIM3Q96PE6 472 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 KIAA1257Q9ULG3 409 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 PIN4Q9Y237 131 aaKnown RBP23■■□□□ 1.27
PDLIM2-216ENST00000464275 USTQ9Y2C2 406 aa23■■□□□ 1.27
PDLIM2-216ENST00000464275 C6orf222P0C671 652 aaPredicted RBP22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 CYBAP13498 195 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 COILP38432 576 aaPredicted RBP22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 FNTAP49354 379 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 IRAK1P51617 712 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 CNGA2Q16280 664 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 CCDC137Q6PK04 289 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 LRIG3Q6UXM1 1119 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 HHIPL1Q96JK4 782 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 ZMAT2Q96NC0 199 aaKnown RBP22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 MCEEQ96PE7 176 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 TSPAN18Q96SJ8 248 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 MTG1Q9BT17 334 aaPredicted RBP22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 WDR35Q9P2L0 1181 aa22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.99■■□□□ 1.27
PDLIM2-216ENST00000464275 PODXLO00592 558 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 PSMC4P43686 418 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 DRG2P55039 364 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 GSCP56915 257 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 ORC1Q13415 861 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 PTPN20Q4JDL3 420 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 SGO2Q562F6 1265 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 DNAJC21Q5F1R6 531 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 LRRC52Q8N7C0 313 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 LRRC45Q96CN5 670 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 HEXIM2Q96MH2 286 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 CXCL16Q9H2A7 254 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 DPH5Q9H2P9 285 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 NXF3Q9H4D5 531 aaKnown RBP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 LRRC19Q9H756 370 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 MYADML2A6NDP7 307 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 EIF3HO15372 352 aaKnown RBP eCLIP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 RECQL4O94761 1208 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 MICAL2O94851 1124 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 HMGCRP04035 888 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 NDST1P52848 882 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 PIGHQ14442 188 aaPredicted RBP22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 CYP4A22Q5TCH4 519 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 TAF2Q6P1X5 1199 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 TTC27Q6P3X3 843 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 EXD1Q8NHP7 514 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 ZIC5Q96T25 663 aa22.98■■□□□ 1.27
PDLIM2-216ENST00000464275 NEUROG2Q9H2A3 272 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms