RNA–Protein interactions for RNA: ENST00000463837.5

CCDC88B-204, Transcript of coiled-coil domain containing 88B, humanhuman

TSL 2

Gene CCDC88B, Length 5,235 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88B-204ENST00000463837 PKN1Q16512 942 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 CCNG2Q16589 344 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 SCUBE1Q8IWY4 988 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 SPDYE1Q8NFV5 336 aaPredicted RBP19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 JADE3Q92613 823 aa19.84■□□□□ 0.77
CCDC88B-204ENST00000463837 TMCC1O94876 653 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 NME3Q13232 169 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 AASDHQ4L235 1098 aaPredicted RBP19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 SLC10A5Q5PT55 438 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 CREG2Q8IUH2 290 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 CENPTQ96BT3 561 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 MED15Q96RN5 788 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 TLR10Q9BXR5 811 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 ADNPQ9H2P0 1102 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 CEP170BQ9Y4F5 1589 aaPredicted RBP19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 HNRNPRO43390 633 aaKnown RBP19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 GLRA3O75311 464 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 PDK1Q15118 436 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 TKFCQ3LXA3 575 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 C1orf131Q8NDD1 294 aaKnown RBP19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 AK9Q5TCS8 1911 aa19.83■□□□□ 0.77
CCDC88B-204ENST00000463837 GPD1P21695 349 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 KCNA1Q09470 495 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 USP10Q14694 798 aaKnown RBP19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 KBTBD12Q3ZCT8 623 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 TWF2Q6IBS0 349 aaKnown RBP19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 SNX19Q92543 992 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 KIF12Q96FN5 646 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 TASP1Q9H6P5 420 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 OVGP1Q12889 678 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 WLSQ5T9L3 541 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 LRRC6Q86X45 466 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 OR6P1Q8NGX9 317 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 TBC1D16Q8TBP0 767 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 RNF217Q8TC41 542 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 ZNF507Q8TCN5 953 aa19.83■□□□□ 0.76
CCDC88B-204ENST00000463837 LOC100653049A0A140TA62 436 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 TRPC5OSA6NMA1 111 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 KRT34O76011 436 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 SCFD1Q8WVM8 642 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 ZBTB10Q96DT7 871 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 SP110Q9HB58 689 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 GID8Q9NWU2 228 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 DIP2AQ14689 1571 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 MTSS1O43312 755 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 RIPK2O43353 540 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 TRAPPC3O43617 180 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 FAM111AQ96PZ2 611 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 TEX12Q9BXU0 123 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 ZC4H2Q9NQZ6 224 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 ZNF212Q9UDV6 495 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 E5RI56 91 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 STRNO43815 780 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 SULT1E1P49888 294 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 SH3RF1Q7Z6J0 888 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 PLEKHA5Q9HAU0 1116 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 C20orf96Q9NUD7 363 aaPredicted RBP19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 DCDC2Q9UHG0 476 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 FDFT1P37268 417 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 STAT5BP51692 787 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 GIT2Q14161 759 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 RNF149Q8NC42 400 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 EXD1Q8NHP7 514 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 SPON1Q9HCB6 807 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 SARS2Q9NP81 518 aaKnown RBP19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 DDX28Q9NUL7 540 aaKnown RBP19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 TAGLN3Q9UI15 199 aa19.82■□□□□ 0.76
CCDC88B-204ENST00000463837 CNTFP26441 200 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 EMC2Q15006 297 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 TRMT5Q32P41 509 aaKnown RBP19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 BOLA3Q53S33 107 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 TBC1D4O60343 1298 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 GPAT2Q6NUI2 795 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 CALML6Q8TD86 181 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 RUSC1Q9BVN2 902 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 C15orf41Q9Y2V0 281 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 ASB14A6NK59 587 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 TCN1P20061 433 aaPredicted RBP19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 ACADSBP45954 432 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 NFIXQ14938 502 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 ELMOD1Q8N336 334 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 MREGQ8N565 214 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 URGCPQ8TCY9 931 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 CHCHD3Q9NX63 227 aaKnown RBP19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 TECPR2O15040 1411 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 MSH4O15457 936 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 BNIP3LO60238 219 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 DAB1O75553 588 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 THRAP10827 490 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 STX5Q13190 355 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 RBBP7Q16576 425 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 KIAA2013Q8IYS2 634 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 TBX20Q9UMR3 447 aa19.81■□□□□ 0.76
CCDC88B-204ENST00000463837 SGPL1O95470 568 aa19.8■□□□□ 0.76
CCDC88B-204ENST00000463837 ERVK-9P63128 1117 aa19.8■□□□□ 0.76
CCDC88B-204ENST00000463837 CUL2Q13617 745 aa19.8■□□□□ 0.76
CCDC88B-204ENST00000463837 FAM71DQ8N9W8 422 aa19.8■□□□□ 0.76
CCDC88B-204ENST00000463837 TRPC1P48995 793 aa19.8■□□□□ 0.76
CCDC88B-204ENST00000463837 EFL1Q7Z2Z2 1120 aaKnown RBP19.8■□□□□ 0.76
CCDC88B-204ENST00000463837 MMP19Q99542 508 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms