RNA–Protein interactions for RNA: ENST00000463539.5

CCDC78-206, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,831 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-206ENST00000463539 SCN1AP35498 2009 aa20.19■□□□□ 0.82
CCDC78-206ENST00000463539 O00370 1275 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 CYB561D2O14569 222 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 ENPP3O14638 875 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 MMP8P22894 467 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 RRM1P23921 792 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 CYP2C18P33260 490 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 GNL1P36915 607 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-206ENST00000463539 CLLU1OSQ5K130 101 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 LIN9Q5TKA1 542 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 ACOT1Q86TX2 421 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 PDCL2Q8N4E4 241 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 URGCPQ8TCY9 931 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 UROC1Q96N76 676 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 PAAF1Q9BRP4 392 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 GOLPH3Q9H4A6 298 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 NCK2O43639 380 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 BUB1BO60566 1050 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-206ENST00000463539 MTA2O94776 668 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 MICAL2O94851 1124 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 SLU7O95391 586 aaKnown RBP20.18■□□□□ 0.82
CCDC78-206ENST00000463539 CXCL10P02778 98 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 FGFR1P11362 822 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 TERF1P54274 439 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 STILQ15468 1287 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 CNGA2Q16280 664 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 C2CD6Q53TS8 623 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 SLFN11Q7Z7L1 901 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 C3orf58Q8NDZ4 430 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 ZNF564Q8TBZ8 553 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-206ENST00000463539 RABGGTAQ92696 567 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 TMEM106CQ9BVX2 250 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 TLR10Q9BXR5 811 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 ELAC1Q9H777 363 aaKnown RBP20.18■□□□□ 0.82
CCDC78-206ENST00000463539 TMEM39AQ9NV64 488 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 SNX12Q9UMY4 172 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 NME7Q9Y5B8 376 aa20.18■□□□□ 0.82
CCDC78-206ENST00000463539 M0QYV0 167 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 CLTBP09497 229 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 WARSP23381 471 aaKnown RBP20.17■□□□□ 0.82
CCDC78-206ENST00000463539 IGFBP6P24592 240 aaPredicted RBP20.17■□□□□ 0.82
CCDC78-206ENST00000463539 NOMO2Q5JPE7 1267 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 MEI1Q5TIA1 1274 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 C12orf29Q8N999 325 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 SENP8Q96LD8 212 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 STXBP5LQ9Y2K9 1186 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 HYOU1Q9Y4L1 999 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 PCDHB7Q9Y5E2 793 aa20.17■□□□□ 0.82
CCDC78-206ENST00000463539 B3GAT3O94766 335 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 CALB1P05937 261 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 FAM163BP0C2L3 166 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 LCLAT1Q6UWP7 414 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 DSTYKQ6XUX3 929 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 PEX26Q7Z412 305 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 WDTC1Q8N5D0 677 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 DPEP3Q9H4B8 488 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 TSPAN16Q9UKR8 245 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 PDGFRBP09619 1106 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 AARSP49588 968 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCDC78-206ENST00000463539 PTP4A2Q12974 167 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 WHAMMP3Q1A5X7 153 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 LRRC26Q2I0M4 334 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 TCTN1Q2MV58 587 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 WSCD1Q658N2 575 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 C11orf63Q6NUN7 778 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 DEFB128Q7Z7B8 93 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 ERICH1Q86X53 443 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 ABI1Q8IZP0 508 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 TNIP3Q96KP6 325 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 FAM49BQ9NUQ9 324 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 KANSL3Q9P2N6 904 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 SCINQ9Y6U3 715 aa20.16■□□□□ 0.82
CCDC78-206ENST00000463539 HCRTO43612 131 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 SRGAP2O75044 1071 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 PRLRP16471 622 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 TCP1P17987 556 aaKnown RBP20.15■□□□□ 0.82
CCDC78-206ENST00000463539 LMO2P25791 158 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 GOLGA7BQ2TAP0 167 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 NECAB2Q7Z6G3 386 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 PHLDB2Q86SQ0 1253 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 CRYBG2Q8N1P7 616 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 TMEM86AQ8N2M4 240 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 MSANTD4Q8NCY6 345 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 MNS1Q8NEH6 495 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 CARD6Q9BX69 1037 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 MRPL47Q9HD33 250 aaKnown RBP20.15■□□□□ 0.82
CCDC78-206ENST00000463539 LRFN2Q9ULH4 789 aa20.15■□□□□ 0.82
CCDC78-206ENST00000463539 PACSIN2Q9UNF0 486 aaPredicted RBP20.15■□□□□ 0.82
CCDC78-206ENST00000463539 TANC1Q9C0D5 1861 aa20.14■□□□□ 0.82
CCDC78-206ENST00000463539 CAPN2P17655 700 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 PAX3P23760 479 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 DNA2P51530 1060 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 RNASELQ05823 741 aaKnown RBP20.14■□□□□ 0.81
CCDC78-206ENST00000463539 RPS6KA1Q15418 735 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 PTPROQ16827 1216 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 PAN2Q504Q3 1202 aaKnown RBP20.14■□□□□ 0.81
CCDC78-206ENST00000463539 PPP1R26Q5T8A7 1209 aaPredicted RBP20.14■□□□□ 0.81
CCDC78-206ENST00000463539 LLGL2Q6P1M3 1020 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 OSTM1Q86WC4 334 aa20.14■□□□□ 0.81
CCDC78-206ENST00000463539 OSBPL9Q96SU4 736 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms