RNA–Protein interactions for RNA: ENST00000463183.1

LINC00960-201, long intergenic non-protein coding RNA 960, humanhuman

TSL 1 (best) BASIC

Gene LINC00960, Length 1,333 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00960-201ENST00000463183 VEPH1Q14D04 833 aa19.3■□□□□ 0.68
LINC00960-201ENST00000463183 CCDC142Q17RM4 750 aa19.3■□□□□ 0.68
LINC00960-201ENST00000463183 GPIHBP1Q8IV16 184 aa19.3■□□□□ 0.68
LINC00960-201ENST00000463183 C12orf56Q8IXR9 622 aa19.3■□□□□ 0.68
LINC00960-201ENST00000463183 CCDC34Q96HJ3 373 aa19.3■□□□□ 0.68
LINC00960-201ENST00000463183 AVENQ9NQS1 362 aaPredicted RBP19.3■□□□□ 0.68
LINC00960-201ENST00000463183 GDE1Q9NZC3 331 aa19.3■□□□□ 0.68
LINC00960-201ENST00000463183 PCDHB5Q9Y5E4 795 aa19.3■□□□□ 0.68
LINC00960-201ENST00000463183 PRPF40AO75400 957 aaKnown RBP19.29■□□□□ 0.68
LINC00960-201ENST00000463183 CST3P01034 146 aaPredicted RBP19.29■□□□□ 0.68
LINC00960-201ENST00000463183 TUFMP49411 452 aaKnown RBP19.29■□□□□ 0.68
LINC00960-201ENST00000463183 SOWAHAQ2M3V2 549 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 TANGO2Q6ICL3 276 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 DNAJB7Q7Z6W7 309 aaPredicted RBP19.29■□□□□ 0.68
LINC00960-201ENST00000463183 TMEM86AQ8N2M4 240 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 TOP6BLQ8N6T0 577 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 STKLD1Q8NE28 680 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 PLEKHO2Q8TD55 490 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 ZSWIM3Q96MP5 696 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 KCTD10Q9H3F6 313 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 ZNF334Q9HCZ1 680 aaPredicted RBP19.29■□□□□ 0.68
LINC00960-201ENST00000463183 GDAP2Q9NXN4 497 aa19.29■□□□□ 0.68
LINC00960-201ENST00000463183 KRBA1A5PL33 1030 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 CALUO43852 315 aaPredicted RBP19.28■□□□□ 0.68
LINC00960-201ENST00000463183 MOSPD3O75425 235 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 RHOBTB3O94955 611 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 KIF20AO95235 890 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 ATF6P18850 670 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 GPR15P49685 360 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 PSMC1P62191 440 aaKnown RBP19.28■□□□□ 0.68
LINC00960-201ENST00000463183 GRM2Q14416 872 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 INTS6LQ5JSJ4 861 aaKnown RBP19.28■□□□□ 0.68
LINC00960-201ENST00000463183 FAM78AQ5JUQ0 283 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 SDHAF4Q5VUM1 108 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 ITIH5Q86UX2 942 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 SMYD4Q8IYR2 804 aaPredicted RBP19.28■□□□□ 0.68
LINC00960-201ENST00000463183 TMEM105Q8N8V8 129 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 LEMD2Q8NC56 503 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 SHKBP1Q8TBC3 707 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 SPPL2BQ8TCT7 592 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 ZNF516Q92618 1163 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 ERCC4Q92889 916 aaPredicted RBP19.28■□□□□ 0.68
LINC00960-201ENST00000463183 ELMO3Q96BJ8 720 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 PLA2G2FQ9BZM2 168 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 ATXN3LQ9H3M9 355 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 NXF1Q9UBU9 619 aaKnown RBP19.28■□□□□ 0.68
LINC00960-201ENST00000463183 WNT16Q9UBV4 365 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 GTF3C4Q9UKN8 822 aa19.28■□□□□ 0.68
LINC00960-201ENST00000463183 LRRIQ3A6PVS8 624 aaPredicted RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 PDXKO00764 312 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 PDGFRBP09619 1106 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 HAPLN1P10915 354 aaPredicted RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 GABRR2P28476 465 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 PLA2G5P39877 138 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 LHX1P48742 406 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 MYL6P60660 151 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 TNNC1P63316 161 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 STXBP5Q5T5C0 1151 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 CWF19L1Q69YN2 538 aaKnown RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 ASTLQ6HA08 431 aaPredicted RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 TMC8Q8IU68 726 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 PRSS33Q8NF86 280 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 ZSCAN18Q8TBC5 510 aaPredicted RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 C2orf15Q8WU43 125 aaKnown RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 PSMG2Q969U7 264 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 ACBD6Q9BR61 282 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 GZF1Q9H116 711 aaPredicted RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 ARHGEF3Q9NR81 526 aa19.27■□□□□ 0.68
LINC00960-201ENST00000463183 MAGED2Q9UNF1 606 aaPredicted RBP19.27■□□□□ 0.68
LINC00960-201ENST00000463183 ATP2C2O75185 946 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 NPR3P17342 541 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 LMO2P25791 158 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 PCSK1P29120 753 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 VIPR2P41587 438 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 DLG4P78352 724 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 CYP4F8P98187 520 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 SMARCB1Q12824 385 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 SNW1Q13573 536 aaKnown RBP19.26■□□□□ 0.67
LINC00960-201ENST00000463183 NFE2Q16621 373 aaPredicted RBP19.26■□□□□ 0.67
LINC00960-201ENST00000463183 WDR72Q3MJ13 1102 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 SPATA2LQ8IUW3 424 aaPredicted RBP19.26■□□□□ 0.67
LINC00960-201ENST00000463183 FMR1NBQ8N0W7 255 aaPredicted RBP19.26■□□□□ 0.67
LINC00960-201ENST00000463183 GCNAQ96QF7 691 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 SYT15Q9BQS2 421 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 MRPL45Q9BRJ2 306 aaKnown RBP19.26■□□□□ 0.67
LINC00960-201ENST00000463183 LRRC3Q9BY71 257 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 SNX25Q9H3E2 840 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 TBC1D17Q9HA65 648 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 ZFP14Q9HCL3 533 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.26■□□□□ 0.67
LINC00960-201ENST00000463183 DMAC2Q9NW81 257 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 FRMD4BQ9Y2L6 1034 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 ASB3Q9Y575 518 aa19.26■□□□□ 0.67
LINC00960-201ENST00000463183 MYBPHLA2RUH7 354 aa19.25■□□□□ 0.67
LINC00960-201ENST00000463183 PI15O43692 258 aa19.25■□□□□ 0.67
LINC00960-201ENST00000463183 ECI2O75521 394 aa19.25■□□□□ 0.67
LINC00960-201ENST00000463183 NR2F2P24468 414 aa19.25■□□□□ 0.67
LINC00960-201ENST00000463183 CYP2F1P24903 491 aa19.25■□□□□ 0.67
LINC00960-201ENST00000463183 EPHA5P54756 1037 aa19.25■□□□□ 0.67
LINC00960-201ENST00000463183 DDR2Q16832 855 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms