RNA–Protein interactions for RNA: ENST00000462970.5

PSMD4-208, Transcript of proteasome 26S subunit, non-ATPase 4, human

TSL 5

Gene PSMD4, Length 900 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMD4-208	ENST00000462970	MGAT5B	Q3V5L5	792 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	SV2A	Q7L0J3	742 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	OTOP3	Q7RTS5	596 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	OSTM1	Q86WC4	334 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	TCEAL8	Q8IYN2	117 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	TMEM86A	Q8N2M4	240 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	TTC9B	Q8N6N2	239 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	TOP6BL	Q8N6T0	577 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	TRIML1	Q8N9V2	468 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	CCDC150	Q8NCX0	1101 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	ING5	Q8WYH8	240 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	ACSF2	Q96CM8	615 aa	Predicted RBP	10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	RTP3	Q9BQQ7	232 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	SYT15	Q9BQS2	421 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	CORO1B	Q9BR76	489 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	MRPL45	Q9BRJ2	306 aa	Known RBP	10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	PI4K2A	Q9BTU6	479 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	IMPG2	Q9BZV3	1241 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	ZCWPW1	Q9H0M4	648 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	SMYD3	Q9H7B4	428 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	ARMCX3	Q9UH62	379 aa	Predicted RBP	10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	YIPF1	Q9Y548	306 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	DOCK8	Q8NF50	2099 aa		10.3	□□□□□ -0.76
PSMD4-208	ENST00000462970	ZNF638	Q14966	1978 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	FAM86C2P	A6NEL3	165 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	LOC730098	B7Z3J9	87 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	IKBKB	O14920	756 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	SLC16A3	O15427	465 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	ATP2C2	O75185	946 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	C4BPA	P04003	597 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	MYL4	P12829	197 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	P4HA1	P13674	534 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	PTPN2	P17706	415 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	ATIC	P31939	592 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	GNL1	P36915	607 aa	Predicted RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	EPHB3	P54753	998 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	PPP3CA	Q08209	521 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	TAF12	Q16514	161 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	CCDC142	Q17RM4	750 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	SGSM1	Q2NKQ1	1148 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	ZACN	Q401N2	412 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	PABPC1L	Q4VXU2	614 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	C1orf220	Q5T0J3	134 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	IQCE	Q6IPM2	695 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	SPOPL	Q6IQ16	392 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	CYP26C1	Q6V0L0	522 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	LRRTM3	Q86VH5	581 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	RNF135	Q8IUD6	432 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	ST13P5	Q8NFI4	369 aa	Predicted RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	GPT2	Q8TD30	523 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	GIPC2	Q8TF65	315 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	ZNF512	Q96ME7	567 aa	Predicted RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	DUSP9	Q99956	384 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	MKNK1	Q9BUB5	465 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	SRRT	Q9BXP5	876 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	WDR6	Q9NNW5	1121 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	DNMT3B	Q9UBC3	853 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	LIMD1	Q9UGP4	676 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	GTF3C4	Q9UKN8	822 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	MRPS23	Q9Y3D9	190 aa	Known RBP	10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	PCDHB5	Q9Y5E4	795 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	NOTCH4	Q99466	2003 aa		10.29	□□□□□ -0.76
PSMD4-208	ENST00000462970	TRIO	O75962	3097 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	C19orf67	A6NJJ6	358 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970		A8MXQ7	604 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	VNN2	O95498	520 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	MBD3	O95983	291 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	WARS	P23381	471 aa	Known RBP	10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	LMO2	P25791	158 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	HOXA9	P31269	272 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	MXI1	P50539	228 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	CDH8	P55286	799 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	CLDN10	P78369	228 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	CYP27A1	Q02318	531 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	PLD1	Q13393	1074 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	VEPH1	Q14D04	833 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	MDH1B	Q5I0G3	518 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	INTS6L	Q5JSJ4	861 aa	Known RBP	10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	TTI2	Q6NXR4	508 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	DPH6	Q7L8W6	267 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	SPATA2L	Q8IUW3	424 aa	Predicted RBP	10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	SCN4B	Q8IWT1	228 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	HS6ST3	Q8IZP7	471 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	GPR152	Q8TDT2	470 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	TAS1R2	Q8TE23	839 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	TMEM174	Q8WUU8	243 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	KBTBD7	Q8WVZ9	684 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	CEP63	Q96MT8	703 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	MYADM	Q96S97	322 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	LPIN3	Q9BQK8	851 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	ACBD6	Q9BR61	282 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	RHOBTB2	Q9BYZ6	727 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	XYLT2	Q9H1B5	865 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	CRISPLD1	Q9H336	500 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	TMEM8A	Q9HCN3	771 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	TMLHE	Q9NVH6	421 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	MUTYH	Q9UIF7	546 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	MAFF	Q9ULX9	164 aa		10.28	□□□□□ -0.76
PSMD4-208	ENST00000462970	FGFR1OP	O95684	399 aa	Known RBP	10.27	□□□□□ -0.77
PSMD4-208	ENST00000462970	ASGR2	P07307	311 aa		10.27	□□□□□ -0.77

Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms