RNA–Protein interactions for RNA: ENST00000462899.1

SMC3-202, Transcript of structural maintenance of chromosomes 3, humanhuman

TSL 5

Gene SMC3, Length 777 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-202ENST00000462899 C18orf25Q96B23 403 aaPredicted RBP8.44□□□□□ -1.06
SMC3-202ENST00000462899 MTMR9Q96QG7 549 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 KIFC3Q9BVG8 833 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 CDT1Q9H211 546 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 SLITRK6Q9H5Y7 841 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 GJB4Q9NTQ9 266 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 SLC38A7Q9NVC3 462 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 TNFSF13BQ9Y275 285 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 MSRB2Q9Y3D2 182 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 GPSM3Q9Y4H4 160 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 STK36Q9NRP7 1315 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 ATMQ13315 3056 aa8.44□□□□□ -1.06
SMC3-202ENST00000462899 DCLK1O15075 740 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 HYAL3O43820 417 aaPredicted RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 MED24O75448 989 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 EGFP01133 1207 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 CYP11B2P19099 503 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 ATP2B1P20020 1258 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 RPL9P32969 192 aaKnown RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 MCM2P49736 904 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 KARSQ15046 597 aaKnown RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 ITPRIPL2Q3MIP1 535 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 DAB2IPQ5VWQ8 1189 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 MAEAQ7L5Y9 396 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 SYT13Q7L8C5 426 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 PIP4P1Q86T03 277 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 PROSER1Q86XN7 944 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 CATSPER3Q86XQ3 398 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 TMEM130Q8N3G9 435 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 TTC9BQ8N6N2 239 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 BPIFB1Q8TDL5 484 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 ZNF274Q96GC6 653 aaPredicted RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 TBC1D32Q96NH3 1257 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 HHIPQ96QV1 700 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 ACO2Q99798 780 aaKnown RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 POLR3CQ9BUI4 534 aaPredicted RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 TTC12Q9H892 705 aaPredicted RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 FBRSL1Q9HCM7 1045 aaKnown RBP8.43□□□□□ -1.06
SMC3-202ENST00000462899 TMEM9BQ9NQ34 198 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 KLK13Q9UKR3 277 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 TBX20Q9UMR3 447 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 PCDHA12Q9UN75 941 aa8.43□□□□□ -1.06
SMC3-202ENST00000462899 MYOFQ9NZM1 2061 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 MTMR11A4FU01 709 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 UPK3BL1B0FP48 263 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 PATE3B3GLJ2 98 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 UPK3BL2E5RIL1 263 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 ATG13O75143 517 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 RHOBTB1O94844 696 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 BAG4O95429 457 aaKnown RBP8.42□□□□□ -1.06
SMC3-202ENST00000462899 OR4Q2P0C623 313 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 CPB1P15086 417 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 EFNA5P52803 228 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 CREB5Q02930 508 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 DUSP4Q13115 394 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 NR5A1Q13285 461 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 GPR17Q13304 367 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 PLD1Q13393 1074 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 ELF2Q15723 593 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 NAIF1Q69YI7 327 aaPredicted RBP8.42□□□□□ -1.06
SMC3-202ENST00000462899 CENPPQ6IPU0 288 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 HAUS6Q7Z4H7 955 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 TMEM150AQ86TG1 271 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 RASSF3Q86WH2 238 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 SKAP1Q86WV1 359 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 DEFB124Q8NES8 71 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 APPL2Q8NEU8 664 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 FAM200AQ8TCP9 573 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 SLC6A16Q9GZN6 736 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 TUFT1Q9NNX1 390 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 TOPORSQ9NS56 1045 aaPredicted RBP8.42□□□□□ -1.06
SMC3-202ENST00000462899 HSFX1Q9UBD0 423 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 EVLQ9UI08 416 aaPredicted RBP8.42□□□□□ -1.06
SMC3-202ENST00000462899 TPCN1Q9ULQ1 816 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 SLC8A2Q9UPR5 921 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 ASB3Q9Y575 518 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 PHLPP2Q6ZVD8 1323 aa8.42□□□□□ -1.06
SMC3-202ENST00000462899 LARGE1O95461 756 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 APBB3O95704 486 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 FGF19O95750 216 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 ATF6P18850 670 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 BCKDHBP21953 392 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 GABRR2P28476 465 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 LRPAP1P30533 357 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 MCM4P33991 863 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 CYP4F8P98187 520 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 YWHAHQ04917 246 aaPredicted RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 SCRN1Q12765 414 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 GRSF1Q12849 480 aaKnown RBP eCLIP8.41□□□□□ -1.06
SMC3-202ENST00000462899 RUNX3Q13761 415 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 PPP2R5AQ15172 486 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 CALCRLQ16602 461 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 GPR158Q5T848 1215 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 PEAR1Q5VY43 1037 aaPredicted RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 TRIM68Q6AZZ1 485 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 KIAA1211LQ6NV74 962 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 RUFY3Q7L099 469 aa8.41□□□□□ -1.06
SMC3-202ENST00000462899 DNAJB7Q7Z6W7 309 aaPredicted RBP8.41□□□□□ -1.06
SMC3-202ENST00000462899 DEPTORQ8TB45 409 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms