RNA–Protein interactions for RNA: ENST00000462700.5

COL9A3-203, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 1,237 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-203ENST00000462700 ISM2Q6H9L7 571 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 UBALD2Q8IYN6 164 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 MMS19Q96T76 1030 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 SEPT5Q99719 369 aaPredicted RBP20.2■□□□□ 0.82
COL9A3-203ENST00000462700 LRFN3Q9BTN0 628 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 DNAJC25Q9H1X3 360 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 TMLHEQ9NVH6 421 aa20.2■□□□□ 0.82
COL9A3-203ENST00000462700 HCRTO43612 131 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 SOAT2O75908 522 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 VNN1O95497 513 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 KRT13P13646 458 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 WARSP23381 471 aaKnown RBP20.19■□□□□ 0.82
COL9A3-203ENST00000462700 PCSK1P29120 753 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 TUFMP49411 452 aaKnown RBP20.19■□□□□ 0.82
COL9A3-203ENST00000462700 PMS1P54277 932 aaKnown RBP20.19■□□□□ 0.82
COL9A3-203ENST00000462700 EPHB3P54753 998 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 TNNC1P63316 161 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 ENPEPQ07075 957 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 SIGLEC14Q08ET2 396 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 NCOA4Q13772 614 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 NFE2Q16621 373 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-203ENST00000462700 MGAT5BQ3V5L5 792 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 ZACNQ401N2 412 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 PRSS36Q5K4E3 855 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 TRIM67Q6ZTA4 783 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 PDZD4Q76G19 769 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-203ENST00000462700 NPAS3Q8IXF0 933 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 HS6ST3Q8IZP7 471 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 ING5Q8WYH8 240 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 EEF2KMTQ96G04 330 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 PKMYT1Q99640 499 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 TSG101Q99816 390 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 MKNK1Q9BUB5 465 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 SMOC2Q9H3U7 446 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 VRTNQ9H8Y1 702 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 ABI2Q9NYB9 513 aaPredicted RBP20.19■□□□□ 0.82
COL9A3-203ENST00000462700 PCDHB5Q9Y5E4 795 aa20.19■□□□□ 0.82
COL9A3-203ENST00000462700 PRR33A8MZF0 331 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 ANHXE9PGG2 379 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 ZNF197O14709 1029 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 CETN3O15182 167 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 TACC1O75410 805 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 TRIM49P0CI25 452 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 TRIM49CP0CI26 452 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 HAPLN1P10915 354 aaPredicted RBP20.18■□□□□ 0.82
COL9A3-203ENST00000462700 CEBPBP17676 345 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 CCR2P41597 374 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 EPHA5P54756 1037 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 TDGQ13569 410 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 STIM1Q13586 685 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 HTR4Q13639 388 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 ZNF699Q32M78 642 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 CYP4A22Q5TCH4 519 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 ANKRD40Q6AI12 368 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 CLEC17AQ6ZS10 378 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 SV2AQ7L0J3 742 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 ZC3H3Q8IXZ2 948 aaKnown RBP20.18■□□□□ 0.82
COL9A3-203ENST00000462700 LEMD2Q8NC56 503 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 RSAD2Q8WXG1 361 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 NXPE3Q969Y0 559 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 TCEAL4Q96EI5 215 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 MRPL45Q9BRJ2 306 aaKnown RBP20.18■□□□□ 0.82
COL9A3-203ENST00000462700 ASAH2Q9NR71 780 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 NXF1Q9UBU9 619 aaKnown RBP20.18■□□□□ 0.82
COL9A3-203ENST00000462700 ASB3Q9Y575 518 aa20.18■□□□□ 0.82
COL9A3-203ENST00000462700 TRIM49BA6NDI0 452 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 MICAL2O94851 1124 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 FAM163BP0C2L3 166 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 CD44P16070 742 aaKnown RBP20.17■□□□□ 0.82
COL9A3-203ENST00000462700 ATF6P18850 670 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 BMP6P22004 513 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 LMO2P25791 158 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 PPP1R2P41236 205 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 MCCD1P59942 119 aaPredicted RBP20.17■□□□□ 0.82
COL9A3-203ENST00000462700 LRRC63Q05C16 580 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 MORC3Q14149 939 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 CCDC142Q17RM4 750 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 TMC8Q8IU68 726 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 PSMG2Q969U7 264 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 SYT15Q9BQS2 421 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 LRRC3Q9BY71 257 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 GTF3C4Q9UKN8 822 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 CDH9Q9ULB4 789 aa20.17■□□□□ 0.82
COL9A3-203ENST00000462700 TMEM221A6NGB7 291 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 M0R296 226 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 BIN1O00499 593 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 NRG2O14511 850 aaPredicted RBP20.16■□□□□ 0.82
COL9A3-203ENST00000462700 PSMA7O14818 248 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 EPB41P11171 864 aaKnown RBP20.16■□□□□ 0.82
COL9A3-203ENST00000462700 MYL4P12829 197 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 CCNE1P24864 410 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 PSMC1P62191 440 aaKnown RBP20.16■□□□□ 0.82
COL9A3-203ENST00000462700 FKBP3Q00688 224 aaKnown RBP20.16■□□□□ 0.82
COL9A3-203ENST00000462700 PPP3CAQ08209 521 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 ZNF667Q5HYK9 610 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 FAM171BQ6P995 826 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 MCRS1Q96EZ8 462 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 ASIC4Q96FT7 647 aa20.16■□□□□ 0.82
COL9A3-203ENST00000462700 DHTKD1Q96HY7 919 aaPredicted RBP20.16■□□□□ 0.82
COL9A3-203ENST00000462700 LPIN3Q9BQK8 851 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms