RNA–Protein interactions for RNA: ENST00000462352.5

CPNE1-221, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-221ENST00000462352 C1RP00736 705 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 PDGFRBP09619 1106 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 CD58P19256 250 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 TBXAS1P24557 533 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-221ENST00000462352 PON1P27169 355 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 PCSK1P29120 753 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 TSPY1Q01534 308 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 INCA1Q0VD86 236 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 KCNMA1Q12791 1236 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 GPR17Q13304 367 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 ADAM15Q13444 863 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 COL19A1Q14993 1142 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 CTC1Q2NKJ3 1217 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 SLC39A12Q504Y0 691 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 INTS6LQ5JSJ4 861 aaKnown RBP12.6□□□□□ -0.39
CPNE1-221ENST00000462352 FKBP15Q5T1M5 1219 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 PHLDB3Q6NSJ2 640 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 ARHGEF19Q8IW93 802 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 PPM1KQ8N3J5 372 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 MAFAQ8NHW3 353 aaPredicted RBP12.6□□□□□ -0.39
CPNE1-221ENST00000462352 ZNF461Q8TAF7 563 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 SYT15Q9BQS2 421 aa12.6□□□□□ -0.39
CPNE1-221ENST00000462352 CILPO75339 1184 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 SPATA31D3P0C874 917 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 NDST1P52848 882 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 PSMC1P62191 440 aaKnown RBP12.59□□□□□ -0.39
CPNE1-221ENST00000462352 APBA1Q02410 837 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 GCNT1Q02742 428 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 SKIV2LQ15477 1246 aaKnown RBP12.59□□□□□ -0.39
CPNE1-221ENST00000462352 TPGS2Q68CL5 300 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 TMEM184AQ6ZMB5 413 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 RNF19BQ6ZMZ0 732 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 EP400NLQ6ZTU2 488 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 SPATA31D4Q6ZUB0 917 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 RRAGAQ7L523 313 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 LRRTM3Q86VH5 581 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 UNC93AQ86WB7 457 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 DCP1BQ8IZD4 617 aaKnown RBP12.59□□□□□ -0.39
CPNE1-221ENST00000462352 KREMEN2Q8NCW0 462 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 CASP10Q92851 521 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 KAT5Q92993 513 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 PABPC5Q96DU9 382 aaKnown RBP12.59□□□□□ -0.39
CPNE1-221ENST00000462352 PKMYT1Q99640 499 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 ANP32EQ9BTT0 268 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 DPEP3Q9H4B8 488 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 FAM124BQ9H5Z6 455 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-221ENST00000462352 SIX2Q9NPC8 291 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 CISHQ9NSE2 258 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 TMLHEQ9NVH6 421 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 CLDND1Q9NY35 253 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 APEX2Q9UBZ4 518 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 HMGXB4Q9UGU5 601 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 AFF4Q9UHB7 1163 aaKnown RBP12.59□□□□□ -0.39
CPNE1-221ENST00000462352 FBXW11Q9UKB1 542 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 GTF3C4Q9UKN8 822 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 CDH9Q9ULB4 789 aa12.59□□□□□ -0.39
CPNE1-221ENST00000462352 BARX2Q9UMQ3 279 aaPredicted RBP12.59□□□□□ -0.39
CPNE1-221ENST00000462352 A0A1B0GTH6 734 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 MYBPHLA2RUH7 354 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 MTMR11A4FU01 709 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 ATP2C2O75185 946 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 VNN2O95498 520 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 SERPINC1P01008 464 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 SRGAP2BP0DMP2 458 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 ATF2P15336 505 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 LTBRP36941 435 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 PLXNA3P51805 1871 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 CDR1P51861 262 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 FANCCQ00597 558 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 UBXN1Q04323 297 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 ADCY1Q08828 1119 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 ORC1Q13415 861 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 CCDC142Q17RM4 750 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 FILIP1LQ4L180 1135 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 DPY19L2P1Q6NXN4 242 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 FAM171BQ6P995 826 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 GJB7Q6PEY0 223 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 GAS2L3Q86XJ1 694 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 TTC39CQ8N584 583 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 UBR7Q8N806 425 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 WHAMMQ8TF30 809 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 HDAC7Q8WUI4 952 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 KREMEN1Q96MU8 473 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 NAP1L5Q96NT1 182 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-221ENST00000462352 PGLYRP2Q96PD5 576 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 TWNKQ96RR1 684 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 LPIN3Q9BQK8 851 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 LSM14BQ9BX40 385 aaKnown RBP12.58□□□□□ -0.4
CPNE1-221ENST00000462352 PLEKHA4Q9H4M7 779 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 UBE2TQ9NPD8 197 aaPredicted RBP12.58□□□□□ -0.4
CPNE1-221ENST00000462352 CRTAC1Q9NQ79 661 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 RTN4Q9NQC3 1192 aaKnown RBP12.58□□□□□ -0.4
CPNE1-221ENST00000462352 MAN1C1Q9NR34 630 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 DPP7Q9UHL4 492 aa12.58□□□□□ -0.4
CPNE1-221ENST00000462352 SPTBN5Q9NRC6 3674 aaKnown RBP12.57□□□□□ -0.4
CPNE1-221ENST00000462352 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
CPNE1-221ENST00000462352 TEX33O43247 280 aa12.57□□□□□ -0.4
CPNE1-221ENST00000462352 TBX10O75333 385 aa12.57□□□□□ -0.4
CPNE1-221ENST00000462352 SEC24AO95486 1093 aa12.57□□□□□ -0.4
CPNE1-221ENST00000462352 PTPN1P18031 435 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms