RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 TMEM134Q9H6X4 195 aa16.6■□□□□ 0.25
APP-211ENST00000462267 TDP1Q9NUW8 608 aa16.6■□□□□ 0.25
APP-211ENST00000462267 TUBGCP4Q9UGJ1 667 aa16.6■□□□□ 0.25
APP-211ENST00000462267 CCL26Q9Y258 94 aa16.6■□□□□ 0.25
APP-211ENST00000462267 LARGE1O95461 756 aa16.59■□□□□ 0.25
APP-211ENST00000462267 TYMPP19971 482 aa16.59■□□□□ 0.25
APP-211ENST00000462267 DDX6P26196 483 aaKnown RBP eCLIP16.59■□□□□ 0.25
APP-211ENST00000462267 U2AF2P26368 475 aaKnown RBP eCLIP16.59■□□□□ 0.25
APP-211ENST00000462267 LRPAP1P30533 357 aa16.59■□□□□ 0.25
APP-211ENST00000462267 KRT2P35908 639 aa16.59■□□□□ 0.25
APP-211ENST00000462267 STK3Q13188 491 aa16.59■□□□□ 0.25
APP-211ENST00000462267 PSMD2Q13200 908 aa16.59■□□□□ 0.25
APP-211ENST00000462267 NR5A1Q13285 461 aa16.59■□□□□ 0.25
APP-211ENST00000462267 HNRNPDQ14103 355 aaKnown RBP16.59■□□□□ 0.25
APP-211ENST00000462267 TAF12Q16514 161 aa16.59■□□□□ 0.25
APP-211ENST00000462267 SLC10A6Q3KNW5 377 aa16.59■□□□□ 0.25
APP-211ENST00000462267 NAIF1Q69YI7 327 aaPredicted RBP16.59■□□□□ 0.25
APP-211ENST00000462267 OVOS1Q6IE37 1185 aa16.59■□□□□ 0.25
APP-211ENST00000462267 ANO7Q6IWH7 933 aa16.59■□□□□ 0.25
APP-211ENST00000462267 MPZL3Q6UWV2 235 aa16.59■□□□□ 0.25
APP-211ENST00000462267 LPCAT2Q7L5N7 544 aa16.59■□□□□ 0.25
APP-211ENST00000462267 HDDC3Q8N4P3 179 aa16.59■□□□□ 0.25
APP-211ENST00000462267 CPA6Q8N4T0 437 aa16.59■□□□□ 0.25
APP-211ENST00000462267 TNFRSF25Q93038 417 aa16.59■□□□□ 0.25
APP-211ENST00000462267 LPIN3Q9BQK8 851 aa16.59■□□□□ 0.25
APP-211ENST00000462267 TARS2Q9BW92 718 aaKnown RBP16.59■□□□□ 0.25
APP-211ENST00000462267 STK36Q9NRP7 1315 aa16.59■□□□□ 0.25
APP-211ENST00000462267 ACACAQ13085 2346 aa16.58■□□□□ 0.25
APP-211ENST00000462267 ABLIM1O14639 778 aa16.58■□□□□ 0.24
APP-211ENST00000462267 RPA1P27694 616 aa16.58■□□□□ 0.24
APP-211ENST00000462267 SLC23A3Q6PIS1 610 aa16.58■□□□□ 0.24
APP-211ENST00000462267 DSTYKQ6XUX3 929 aa16.58■□□□□ 0.24
APP-211ENST00000462267 MAB21L3Q8N8X9 362 aa16.58■□□□□ 0.24
APP-211ENST00000462267 ERMNQ8TAM6 284 aa16.58■□□□□ 0.24
APP-211ENST00000462267 SEPT5Q99719 369 aaPredicted RBP16.58■□□□□ 0.24
APP-211ENST00000462267 ECT2Q9H8V3 914 aa16.58■□□□□ 0.24
APP-211ENST00000462267 POLD4Q9HCU8 107 aa16.58■□□□□ 0.24
APP-211ENST00000462267 BRMS1Q9HCU9 246 aa16.58■□□□□ 0.24
APP-211ENST00000462267 CITO14578 2027 aa16.58■□□□□ 0.24
APP-211ENST00000462267 CCDC169A6NNP5 214 aa16.57■□□□□ 0.24
APP-211ENST00000462267 ATF6P18850 670 aa16.57■□□□□ 0.24
APP-211ENST00000462267 HOXD12P35452 270 aa16.57■□□□□ 0.24
APP-211ENST00000462267 ATXN3P54252 364 aaPredicted RBP16.57■□□□□ 0.24
APP-211ENST00000462267 ZNF268Q14587 947 aaPredicted RBP16.57■□□□□ 0.24
APP-211ENST00000462267 MGAT5BQ3V5L5 792 aa16.57■□□□□ 0.24
APP-211ENST00000462267 SPDYCQ5MJ68 293 aa16.57■□□□□ 0.24
APP-211ENST00000462267 GLIS3Q8NEA6 775 aa16.57■□□□□ 0.24
APP-211ENST00000462267 OLIG1Q8TAK6 271 aa16.57■□□□□ 0.24
APP-211ENST00000462267 USP33Q8TEY7 942 aa16.57■□□□□ 0.24
APP-211ENST00000462267 BBC3Q96PG8 261 aaPredicted RBP16.57■□□□□ 0.24
APP-211ENST00000462267 CCDC86Q9H6F5 360 aaKnown RBP16.57■□□□□ 0.24
APP-211ENST00000462267 PLEKHA5Q9HAU0 1116 aa16.57■□□□□ 0.24
APP-211ENST00000462267 ZSWIM6Q9HCJ5 1215 aa16.57■□□□□ 0.24
APP-211ENST00000462267 GON4LQ3T8J9 2241 aa16.56■□□□□ 0.24
APP-211ENST00000462267 MAP3K13O43283 966 aa16.56■□□□□ 0.24
APP-211ENST00000462267 ALDH1A2O94788 518 aa16.56■□□□□ 0.24
APP-211ENST00000462267 HARSP12081 509 aaKnown RBP16.56■□□□□ 0.24
APP-211ENST00000462267 CYP3A5P20815 502 aa16.56■□□□□ 0.24
APP-211ENST00000462267 MUTP22033 750 aa16.56■□□□□ 0.24
APP-211ENST00000462267 NPTX2P47972 431 aa16.56■□□□□ 0.24
APP-211ENST00000462267 PEX3P56589 373 aa16.56■□□□□ 0.24
APP-211ENST00000462267 LMBRD2Q68DH5 695 aaPredicted RBP16.56■□□□□ 0.24
APP-211ENST00000462267 TAS1R3Q7RTX0 852 aa16.56■□□□□ 0.24
APP-211ENST00000462267 TMEM150AQ86TG1 271 aa16.56■□□□□ 0.24
APP-211ENST00000462267 MDGA1Q8NFP4 955 aa16.56■□□□□ 0.24
APP-211ENST00000462267 ATP2A3Q93084 1043 aa16.56■□□□□ 0.24
APP-211ENST00000462267 SPACA7Q96KW9 195 aa16.56■□□□□ 0.24
APP-211ENST00000462267 LARP6Q9BRS8 491 aaKnown RBP16.56■□□□□ 0.24
APP-211ENST00000462267 TMEM74BQ9NUR3 256 aa16.56■□□□□ 0.24
APP-211ENST00000462267 ARHGAP28Q9P2N2 729 aa16.56■□□□□ 0.24
APP-211ENST00000462267 UBQLN1Q9UMX0 589 aaKnown RBP16.56■□□□□ 0.24
APP-211ENST00000462267 RBM19Q9Y4C8 960 aaKnown RBP16.56■□□□□ 0.24
APP-211ENST00000462267 CYP46A1Q9Y6A2 500 aa16.56■□□□□ 0.24
APP-211ENST00000462267 MAST4O15021 2626 aa16.56■□□□□ 0.24
APP-211ENST00000462267 APC2O95996 2303 aa16.55■□□□□ 0.24
APP-211ENST00000462267 OPHN1O60890 802 aa16.55■□□□□ 0.24
APP-211ENST00000462267 P2RY2P41231 377 aa16.55■□□□□ 0.24
APP-211ENST00000462267 PTGER3P43115 390 aa16.55■□□□□ 0.24
APP-211ENST00000462267 NLRP12P59046 1061 aa16.55■□□□□ 0.24
APP-211ENST00000462267 FAM193AP78312 1265 aa16.55■□□□□ 0.24
APP-211ENST00000462267 NR1H3Q13133 447 aa16.55■□□□□ 0.24
APP-211ENST00000462267 MTF1Q14872 753 aa16.55■□□□□ 0.24
APP-211ENST00000462267 ZBTB6Q15916 424 aa16.55■□□□□ 0.24
APP-211ENST00000462267 CRY1Q16526 586 aa16.55■□□□□ 0.24
APP-211ENST00000462267 PEAR1Q5VY43 1037 aaPredicted RBP16.55■□□□□ 0.24
APP-211ENST00000462267 MON1AQ86VX9 555 aa16.55■□□□□ 0.24
APP-211ENST00000462267 CEP76Q8TAP6 659 aa16.55■□□□□ 0.24
APP-211ENST00000462267 RIN3Q8TB24 985 aa16.55■□□□□ 0.24
APP-211ENST00000462267 C2orf15Q8WU43 125 aaKnown RBP16.55■□□□□ 0.24
APP-211ENST00000462267 OSCP1Q8WVF1 389 aa16.55■□□□□ 0.24
APP-211ENST00000462267 WASF1Q92558 559 aa16.55■□□□□ 0.24
APP-211ENST00000462267 MRPS31Q92665 395 aaKnown RBP16.55■□□□□ 0.24
APP-211ENST00000462267 TMEM60Q9H2L4 133 aa16.55■□□□□ 0.24
APP-211ENST00000462267 BHMT2Q9H2M3 363 aa16.55■□□□□ 0.24
APP-211ENST00000462267 SCUBE2Q9NQ36 999 aa16.55■□□□□ 0.24
APP-211ENST00000462267 DUS2Q9NX74 493 aaKnown RBP16.55■□□□□ 0.24
APP-211ENST00000462267 MBD1Q9UIS9 605 aaPredicted RBP16.55■□□□□ 0.24
APP-211ENST00000462267 MMP17Q9ULZ9 603 aa16.55■□□□□ 0.24
APP-211ENST00000462267 SLC6A14Q9UN76 642 aa16.55■□□□□ 0.24
APP-211ENST00000462267 PI4KAP42356 2102 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms