RNA–Protein interactions for RNA: ENST00000462254.1

CSMD3-205, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 2

Gene CSMD3, Length 457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-205ENST00000462254 CCDC149Q6ZUS6 474 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 OTOP3Q7RTS5 596 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 OVCH2Q7RTZ1 564 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 RASSF3Q86WH2 238 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 LDHDQ86WU2 507 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 ZC3H7AQ8IWR0 971 aaKnown RBP5.23□□□□□ -1.57
CSMD3-205ENST00000462254 SCYL3Q8IZE3 742 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 LILRA2Q8N149 483 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 SDR16C5Q8N3Y7 309 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 FANCBQ8NB91 859 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 GIMAP8Q8ND71 665 aaPredicted RBP5.23□□□□□ -1.57
CSMD3-205ENST00000462254 ACER1Q8TDN7 264 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 DIS3LQ8TF46 1054 aaKnown RBP5.23□□□□□ -1.57
CSMD3-205ENST00000462254 COPS5Q92905 334 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 PHKBQ93100 1093 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 HPS3Q969F9 1004 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 TRIM63Q969Q1 353 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 TMEM60Q9H2L4 133 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 CPVLQ9H3G5 476 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 IFT122Q9HBG6 1241 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 ARFGAP3Q9NP61 516 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 PDLIM7Q9NR12 457 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 MAD2L2Q9UI95 211 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 GJD2Q9UKL4 321 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 LRCH1Q9Y2L9 728 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 GPR52Q9Y2T5 361 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 RNF114Q9Y508 228 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 PCDHA8Q9Y5H6 950 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 BACE2Q9Y5Z0 518 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 ZSWIM8A7E2V4 1837 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 LRRC37A2A6NM11 1700 aa5.23□□□□□ -1.57
CSMD3-205ENST00000462254 A0A1W2PQ45 241 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 A0A1W2PQY0 241 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 hCG_1984214I3L0E3 225 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 CYTH3O43739 400 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 MSL3P1P0C860 447 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 GOLGA8HP0CJ92 632 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 IFNAR1P17181 557 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 SDHBP21912 280 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 CHKAP35790 457 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 MAPK9P45984 424 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 GPR3P46089 330 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 SEPHS1P49903 392 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 ADKP55263 362 aaKnown RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 GPR85P60893 370 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 ZNF543Q08ER8 600 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 VGLL4Q14135 290 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 TOMM20Q15388 145 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 PRSS53Q2L4Q9 553 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 DGKKQ5KSL6 1271 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 EEF1DP3Q658K8 133 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 PDXDC1Q6P996 788 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 LILRA6Q6PI73 481 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 KCNT2Q6UVM3 1135 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 MPZL3Q6UWV2 235 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 SYNE3Q6ZMZ3 975 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 PRR23BQ6ZRT6 265 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 C1orf122Q6ZSJ8 110 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 TMTC3Q6ZXV5 915 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 GPR155Q7Z3F1 870 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 DPP9Q86TI2 863 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 CPNE8Q86YQ8 564 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 KRT78Q8N1N4 520 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 SRBD1Q8N5C6 995 aaKnown RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 CTCFLQ8NI51 663 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 DDX11Q96FC9 970 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 CLMNQ96JQ2 1002 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 MAP3K14Q99558 947 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 LLPHQ9BRT6 129 aaKnown RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 MYLK2Q9H1R3 596 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 SMOC1Q9H4F8 434 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 RBM28Q9NW13 759 aaKnown RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 CLEC1BQ9P126 229 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 PDP2Q9P2J9 529 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 IMPACTQ9P2X3 320 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 SMC3Q9UQE7 1217 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 YBX2Q9Y2T7 364 aaKnown RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 SLC45A1Q9Y2W3 748 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 COQ6Q9Y2Z9 468 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 TMX2Q9Y320 296 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 ZDHHC9Q9Y397 364 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.22□□□□□ -1.57
CSMD3-205ENST00000462254 STK36Q9NRP7 1315 aa5.22□□□□□ -1.57
CSMD3-205ENST00000462254 KLRF2D3W0D1 207 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 F5H6K3 240 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 H3BML4 177 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 ARNTLO00327 626 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 CPLX1O14810 134 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PAX4O43316 350 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 TGM5O43548 720 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 DHX16O60231 1041 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 PPP1R11O60927 126 aaPredicted RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 HIP1RO75146 1068 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 H2AFYO75367 372 aaKnown RBP5.21□□□□□ -1.58
CSMD3-205ENST00000462254 TUSC2O75896 110 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 TBC1D8O95759 1140 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 NDUFB10O96000 172 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 THBDP07204 575 aa5.21□□□□□ -1.58
CSMD3-205ENST00000462254 POU2F2P09086 479 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms