RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SENP8Q96LD8 212 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 GCNAQ96QF7 691 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 LPIN3Q9BQK8 851 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 SLC46A2Q9BY10 475 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 HPS4Q9NQG7 708 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 VPS45Q9NRW7 570 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 GKN1Q9NS71 199 aa11.77□□□□□ -0.53
CBX3-205ENST00000462165 FAM208BQ5VWN6 2430 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 H0YCG3 227 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 LAD1O00515 517 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 PPEF2O14830 753 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 FAM189A1O60320 539 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 RNF40O75150 1001 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 CDC25AP30304 524 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 PRPHP41219 470 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 TOB1P50616 345 aaPredicted RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 RAD51AP2Q09MP3 1159 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 GNL2Q13823 731 aaKnown RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 ENOX2Q16206 610 aaKnown RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 IL17AQ16552 155 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 MGAT5BQ3V5L5 792 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 PLK5Q496M5 336 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 HYIQ5T013 277 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 RNF43Q68DV7 783 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 KCTD17Q8N5Z5 321 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 SYT2Q8N9I0 419 aaPredicted RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 OR10T2Q8NGX3 314 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 C2orf15Q8WU43 125 aaKnown RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 SEPT5Q99719 369 aaPredicted RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 LLPHQ9BRT6 129 aaKnown RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 ZCWPW1Q9H0M4 648 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 SMG9Q9H0W8 520 aaKnown RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 DUSP15Q9H1R2 295 aaPredicted RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 SMOC1Q9H4F8 434 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 RPF1Q9H9Y2 349 aaKnown RBP11.76□□□□□ -0.53
CBX3-205ENST00000462165 KCND2Q9NZV8 630 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 PCDHB6Q9Y5E3 794 aa11.76□□□□□ -0.53
CBX3-205ENST00000462165 OTOL1A6NHN0 477 aaPredicted RBP11.75□□□□□ -0.53
CBX3-205ENST00000462165 PIRO00625 290 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 OGTO15294 1046 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 DRD1P21728 446 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 U2AF2P26368 475 aaKnown RBP eCLIP11.75□□□□□ -0.53
CBX3-205ENST00000462165 SLC12A3P55017 1021 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 HMGN5P82970 282 aaKnown RBP11.75□□□□□ -0.53
CBX3-205ENST00000462165 AMPD2Q01433 879 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 SMARCB1Q12824 385 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 FBXO43Q4G163 708 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 SLC39A12Q504Y0 691 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 C9orf57Q5W0N0 161 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 TRIM68Q6AZZ1 485 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 PSAPL1Q6NUJ1 521 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 DTHD1Q6ZMT9 781 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 CCDC83Q8IWF9 413 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 CD302Q8IX05 232 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 SPPL2BQ8TCT7 592 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 BICD1Q96G01 975 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 EBF3Q9H4W6 596 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 KIF9Q9HAQ2 790 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 LARSQ9P2J5 1176 aaKnown RBP11.75□□□□□ -0.53
CBX3-205ENST00000462165 RALYQ9UKM9 306 aaKnown RBP11.75□□□□□ -0.53
CBX3-205ENST00000462165 DSEQ9UL01 958 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 CACNA1GO43497 2377 aa11.75□□□□□ -0.53
CBX3-205ENST00000462165 ANAPC1Q9H1A4 1944 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 THADAQ6YHU6 1953 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 ANO9A1A5B4 782 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 SOBPA7XYQ1 873 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 ATMINO43313 823 aaPredicted RBP11.74□□□□□ -0.53
CBX3-205ENST00000462165 EGFP01133 1207 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 PIGRP01833 764 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 F11P03951 625 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 HAPLN1P10915 354 aaPredicted RBP11.74□□□□□ -0.53
CBX3-205ENST00000462165 DDX6P26196 483 aaKnown RBP eCLIP11.74□□□□□ -0.53
CBX3-205ENST00000462165 AVPR1AP37288 418 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 LIG4P49917 911 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 KARSQ15046 597 aaKnown RBP11.74□□□□□ -0.53
CBX3-205ENST00000462165 TAF12Q16514 161 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 JADE1Q6IE81 842 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 TCEAL6Q6IPX3 200 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 TMEM150AQ86TG1 271 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 MAB21L3Q8N8X9 362 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 GIPC2Q8TF65 315 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 USP13Q92995 863 aaPredicted RBP11.74□□□□□ -0.53
CBX3-205ENST00000462165 TCEAL3Q969E4 200 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 PNMA5Q96PV4 448 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 EDEM2Q9BV94 578 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 TDP1Q9NUW8 608 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 CPSF3Q9UKF6 684 aaKnown RBP11.74□□□□□ -0.53
CBX3-205ENST00000462165 CCL26Q9Y258 94 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 DMXL2Q8TDJ6 3036 aa11.74□□□□□ -0.53
CBX3-205ENST00000462165 BAHCC1Q9P281 2608 aa11.73□□□□□ -0.53
CBX3-205ENST00000462165 A0A0B4J269 797 aa11.73□□□□□ -0.53
CBX3-205ENST00000462165 BCLAF3A2AJT9 711 aaKnown RBP11.73□□□□□ -0.53
CBX3-205ENST00000462165 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
CBX3-205ENST00000462165 RHOBTB1O94844 696 aa11.73□□□□□ -0.53
CBX3-205ENST00000462165 PLA2G4BP0C869 781 aa11.73□□□□□ -0.53
CBX3-205ENST00000462165 ARSAP15289 507 aa11.73□□□□□ -0.53
CBX3-205ENST00000462165 HMGA1P17096 107 aaKnown RBP11.73□□□□□ -0.53
CBX3-205ENST00000462165 SCP2P22307 547 aa11.73□□□□□ -0.53
CBX3-205ENST00000462165 PTPRDP23468 1912 aa11.73□□□□□ -0.53
CBX3-205ENST00000462165 GALK1P51570 392 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms