RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 GDI1P31150 447 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 MAGEA9P43362 315 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 MYL7Q01449 175 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 DNM1Q05193 864 aaKnown RBP15.01□□□□□ -0.01
USP4-206ENST00000461553 ARHGAP15Q53QZ3 475 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 RESP18Q5W5W9 173 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 LMBRD2Q68DH5 695 aaPredicted RBP15.01□□□□□ -0.01
USP4-206ENST00000461553 VITQ6UXI7 678 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 HS2ST1Q7LGA3 356 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 FRMD5Q7Z6J6 570 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 TMEM86AQ8N2M4 240 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 PDCL2Q8N4E4 241 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 CSGALNACT2Q8N6G5 542 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 IRF7Q92985 503 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 NKD2Q969F2 451 aaPredicted RBP15.01□□□□□ -0.01
USP4-206ENST00000461553 ZSWIM3Q96MP5 696 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 LRRC3Q9BY71 257 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 ATXN3LQ9H3M9 355 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 TRPV4Q9HBA0 871 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 KIAA1586Q9HCI6 787 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 ZNF334Q9HCZ1 680 aaPredicted RBP15.01□□□□□ -0.01
USP4-206ENST00000461553 HEBP1Q9NRV9 189 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 DLGAP2Q9P1A6 1054 aa15.01□□□□□ -0.01
USP4-206ENST00000461553 MRPS17Q9Y2R5 130 aaKnown RBP15.01□□□□□ -0.01
USP4-206ENST00000461553 GVINP1Q7Z2Y8 2422 aa15□□□□□ -0.01
USP4-206ENST00000461553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15□□□□□ -0.01
USP4-206ENST00000461553 CDC25CP30307 473 aa15□□□□□ -0.01
USP4-206ENST00000461553 RBP5P82980 135 aa15□□□□□ -0.01
USP4-206ENST00000461553 MYO1EQ12965 1108 aa15□□□□□ -0.01
USP4-206ENST00000461553 NFE2Q16621 373 aaPredicted RBP15□□□□□ -0.01
USP4-206ENST00000461553 ZC3H14Q6PJT7 736 aaKnown RBP15□□□□□ -0.01
USP4-206ENST00000461553 ZNF852Q6ZMS4 543 aa15□□□□□ -0.01
USP4-206ENST00000461553 EPM2AIP1Q7L775 607 aaPredicted RBP15□□□□□ -0.01
USP4-206ENST00000461553 DNAJB7Q7Z6W7 309 aaPredicted RBP15□□□□□ -0.01
USP4-206ENST00000461553 CBWD2Q8IUF1 395 aa15□□□□□ -0.01
USP4-206ENST00000461553 NELFCDQ8IXH7 590 aa15□□□□□ -0.01
USP4-206ENST00000461553 YAF2Q8IY57 180 aa15□□□□□ -0.01
USP4-206ENST00000461553 ADGRF2Q8IZF7 708 aa15□□□□□ -0.01
USP4-206ENST00000461553 TOP6BLQ8N6T0 577 aa15□□□□□ -0.01
USP4-206ENST00000461553 SPATA18Q8TC71 538 aa15□□□□□ -0.01
USP4-206ENST00000461553 LEO1Q8WVC0 666 aaPredicted RBP15□□□□□ -0.01
USP4-206ENST00000461553 BORCS6Q96GS4 357 aa15□□□□□ -0.01
USP4-206ENST00000461553 FAM84AQ96KN4 292 aa15□□□□□ -0.01
USP4-206ENST00000461553 OSBPL6Q9BZF3 934 aa15□□□□□ -0.01
USP4-206ENST00000461553 BLZF1Q9H2G9 400 aa15□□□□□ -0.01
USP4-206ENST00000461553 AGPAT3Q9NRZ7 376 aa15□□□□□ -0.01
USP4-206ENST00000461553 INTS13Q9NVM9 706 aa15□□□□□ -0.01
USP4-206ENST00000461553 DDX43Q9NXZ2 648 aaKnown RBP15□□□□□ -0.01
USP4-206ENST00000461553 L1RE1Q9UN81 338 aa15□□□□□ -0.01
USP4-206ENST00000461553 PCDHB5Q9Y5E4 795 aa15□□□□□ -0.01
USP4-206ENST00000461553 GTF3C3Q9Y5Q9 886 aa15□□□□□ -0.01
USP4-206ENST00000461553 SNX9Q9Y5X1 595 aa15□□□□□ -0.01
USP4-206ENST00000461553 MYH10P35580 1976 aa15□□□□□ -0.01
USP4-206ENST00000461553 PTPRJQ12913 1337 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 PRR23AA6NEV1 266 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 FAM170BA6NMN3 283 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 HEPACAM2A8MVW5 462 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 DPYSL4O14531 572 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 ZNF263O14978 683 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 NCAM2O15394 837 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 LRRN2O75325 713 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 HAPLN1P10915 354 aaPredicted RBP14.99□□□□□ -0.01
USP4-206ENST00000461553 GLULP15104 373 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 CD72P21854 359 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 TARSP26639 723 aaKnown RBP14.99□□□□□ -0.01
USP4-206ENST00000461553 VIPR2P41587 438 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 AFMP43652 599 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 CDR1P51861 262 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 SNRPFP62306 86 aaKnown RBP14.99□□□□□ -0.01
USP4-206ENST00000461553 SNRNP35Q16560 246 aaKnown RBP14.99□□□□□ -0.01
USP4-206ENST00000461553 INTS6LQ5JSJ4 861 aaKnown RBP14.99□□□□□ -0.01
USP4-206ENST00000461553 STXBP5Q5T5C0 1151 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 GPR158Q5T848 1215 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 GAREM2Q75VX8 874 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 WDR49Q8IV35 697 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 C1orf210Q8IVY1 113 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 ZNF507Q8TCN5 953 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 FNBP1Q96RU3 617 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 ACBD6Q9BR61 282 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 SPATA6Q9NWH7 488 aaPredicted RBP14.99□□□□□ -0.01
USP4-206ENST00000461553 GDAP2Q9NXN4 497 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 SIX4Q9UIU6 781 aa14.99□□□□□ -0.01
USP4-206ENST00000461553 NCANO14594 1321 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 PVALEFA0A1B0GWK0 134 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 MAN2B1O00754 1011 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 DLATP10515 647 aaKnown RBP14.98□□□□□ -0.01
USP4-206ENST00000461553 ACAT1P24752 427 aaKnown RBP14.98□□□□□ -0.01
USP4-206ENST00000461553 PCSK1P29120 753 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 CASP1P29466 404 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 HOXD13P35453 343 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 LHX1P48742 406 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 CYP2J2P51589 502 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 CYP4F8P98187 520 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 EHHADHQ08426 723 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 CUL4BQ13620 913 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 DUOXA2Q1HG44 320 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 ASCL5Q7RTU5 278 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 LRRTM3Q86VH5 581 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 MFSD6LQ8IWD5 586 aa14.98□□□□□ -0.01
USP4-206ENST00000461553 OR5B17Q8NGF7 314 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms