RNA–Protein interactions for RNA: ENST00000461433.1

SSBP1-202, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 1,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-202ENST00000461433 ABLIM3O94929 683 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 CLSTN1O94985 981 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 VNN2O95498 520 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 TPM2P07951 284 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 FOSL2P15408 326 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 KLK7P49862 253 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 ROR1Q01973 937 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 GCNT1Q02742 428 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 UBXN1Q04323 297 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 COL19A1Q14993 1142 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 CCDC142Q17RM4 750 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 RRAGAQ7L523 313 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 PALB2Q86YC2 1186 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 THEM5Q8N1Q8 247 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 PPM1KQ8N3J5 372 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 VN1R2Q8NFZ6 395 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 OR6B3Q8NGW1 331 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 ERGIC2Q96RQ1 377 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 TWNKQ96RR1 684 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 LPIN3Q9BQK8 851 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 ANP32EQ9BTT0 268 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 ZCWPW1Q9H0M4 648 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 DPEP3Q9H4B8 488 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 APEX2Q9UBZ4 518 aa12.05□□□□□ -0.48
SSBP1-202ENST00000461433 AJAP1Q9UKB5 411 aaPredicted RBP12.05□□□□□ -0.48
SSBP1-202ENST00000461433 LINC01565O15544 149 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 AP5Z1O43299 807 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 TGM5O43548 720 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 CILPO75339 1184 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 SERPINC1P01008 464 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 ADH1AP07327 375 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 PDGFRBP09619 1106 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 ACO1P21399 889 aaKnown RBP12.04□□□□□ -0.48
SSBP1-202ENST00000461433 KLRC2P26717 231 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 NDST1P52848 882 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 ARPP19P56211 112 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 GPR17Q13304 367 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 SYCP1Q15431 976 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 CTC1Q2NKJ3 1217 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 INTS6LQ5JSJ4 861 aaKnown RBP12.04□□□□□ -0.48
SSBP1-202ENST00000461433 FKBP15Q5T1M5 1219 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 FAM171BQ6P995 826 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 RNF19BQ6ZMZ0 732 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 ZNF461Q8TAF7 563 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 CDCA3Q99618 268 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-202ENST00000461433 SNX25Q9H3E2 840 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 UBE2TQ9NPD8 197 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-202ENST00000461433 PLCB1Q9NQ66 1216 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 CRTAC1Q9NQ79 661 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 CISHQ9NSE2 258 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 TMLHEQ9NVH6 421 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 BARX2Q9UMQ3 279 aaPredicted RBP12.04□□□□□ -0.48
SSBP1-202ENST00000461433 HCFC2Q9Y5Z7 792 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 PTPRDP23468 1912 aa12.04□□□□□ -0.48
SSBP1-202ENST00000461433 MYBPHLA2RUH7 354 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 EPHB6O15197 1021 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 GLP2RO95838 553 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 C1RP00736 705 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 SPATA31D3P0C874 917 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 EPCAMP16422 314 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 CD58P19256 250 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 TBXAS1P24557 533 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 PCSK1P29120 753 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 CDR1P51861 262 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 PSMC1P62191 440 aaKnown RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 ADAM15Q13444 863 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 KLHDC7AQ5VTJ3 777 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 TMEM184AQ6ZMB5 413 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 SPATA31D4Q6ZUB0 917 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 UNC93AQ86WB7 457 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 CRYBG2Q8N1P7 616 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 MICALL1Q8N3F8 863 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 EFHBQ8N7U6 833 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 LSM14BQ9BX40 385 aaKnown RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 NAA15Q9BXJ9 866 aaKnown RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 ELOVL4Q9GZR5 314 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 GANQ9H2C0 597 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 FAM124BQ9H5Z6 455 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 IGFLR1Q9H665 355 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 GTF3C4Q9UKN8 822 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 CDH9Q9ULB4 789 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 A8MXQ7 604 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 RNF225M0QZC1 329 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 SEC24AO95486 1093 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 ATF2P15336 505 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 PTPN1P18031 435 aaKnown RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 LTBRP36941 435 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 PBX1P40424 430 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 RAD23BP54727 409 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 UBASH3AP57075 661 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 ORC1Q13415 861 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 CCDC85BQ15834 202 aaPredicted RBP12.03□□□□□ -0.48
SSBP1-202ENST00000461433 FILIP1LQ4L180 1135 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 TPGS2Q68CL5 300 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 IQCEQ6IPM2 695 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 PPFIBP1Q86W92 1011 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 PPP2R3CQ969Q6 453 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 JAKMIP2Q96AA8 810 aa12.03□□□□□ -0.48
SSBP1-202ENST00000461433 SYT15Q9BQS2 421 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms