RNA–Protein interactions for RNA: ENST00000461394.5

MSH2-204, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-204ENST00000461394 ITGA7Q13683 1181 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 TCEAL1Q15170 157 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 SV2CQ496J9 727 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 CYP4A22Q5TCH4 519 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 CC2D1AQ6P1N0 951 aaPredicted RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 MON1BQ7L1V2 547 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 ZNF572Q7Z3I7 529 aaPredicted RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 ADAT2Q7Z6V5 191 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 PHF13Q86YI8 300 aaPredicted RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 CCDC50Q8IVM0 306 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 USP38Q8NB14 1042 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 OR6B3Q8NGW1 331 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 CCDC26Q8TAB7 109 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 ACTRT1Q8TDG2 376 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 IPO4Q8TEX9 1081 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 RNPC3Q96LT9 517 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 HINFPQ9BQA5 517 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 LRRC1Q9BTT6 524 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 NT5C1AQ9BXI3 368 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 ZNF518BQ9C0D4 1074 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 VRTNQ9H8Y1 702 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 ABCB6Q9NP58 842 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 ST7Q9NRC1 585 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 PARVAQ9NVD7 372 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 CNTN3Q9P232 1028 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 STRIP2Q9ULQ0 834 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 BARX2Q9UMQ3 279 aaPredicted RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 ST3GAL5Q9UNP4 418 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 SBDSQ9Y3A5 250 aaKnown RBP eCLIP7.21□□□□□ -1.26
MSH2-204ENST00000461394 IPPQ9Y573 584 aa7.21□□□□□ -1.26
MSH2-204ENST00000461394 TDRD15B5MCY1 1934 aaKnown RBP7.21□□□□□ -1.26
MSH2-204ENST00000461394 SMIM28A0A1B0GU29 152 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 A8MXQ7 604 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 CCDC188H7C350 402 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 RRP9O43818 475 aaKnown RBP7.2□□□□□ -1.26
MSH2-204ENST00000461394 HUS1O60921 280 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 CILPO75339 1184 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 MICAL2O94851 1124 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 HEXIM1O94992 359 aaKnown RBP7.2□□□□□ -1.26
MSH2-204ENST00000461394 GJB6O95452 261 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 STAU1O95793 577 aaKnown RBP7.2□□□□□ -1.26
MSH2-204ENST00000461394 GNRH1P01148 92 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 IGHA2P01877 340 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 INHAP05111 366 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 GHRP10912 638 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 CD46P15529 392 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 CTNNA2P26232 953 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 MAP2K2P36507 400 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 CETN2P41208 172 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 PNPLA4P41247 253 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 SLC1A1P43005 524 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 VEGFBP49765 207 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 TAF6P49848 677 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 RAD23BP54727 409 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 RWDD2BP57060 319 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 PSMC1P62191 440 aaKnown RBP7.2□□□□□ -1.26
MSH2-204ENST00000461394 GUCY2DQ02846 1103 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 GPS2Q13227 327 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 GOLGA7BQ2TAP0 167 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 GLE1Q53GS7 698 aaKnown RBP7.2□□□□□ -1.26
MSH2-204ENST00000461394 UBXN11Q5T124 520 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 C9orf57Q5W0N0 161 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 LLGL2Q6P1M3 1020 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 SERINC5Q86VE9 423 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 IFT20Q8IY31 132 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 LRRC52Q8N7C0 313 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 SLC4A11Q8NBS3 891 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 UBA3Q8TBC4 463 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 FEZF2Q8TBJ5 459 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 IFT81Q8WYA0 676 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 TFAP2BQ92481 460 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 KRT35Q92764 455 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 FAXDC2Q96IV6 333 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 VCPIP1Q96JH7 1222 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 GLT1D1Q96MS3 346 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 ZMAT2Q96NC0 199 aaKnown RBP7.2□□□□□ -1.26
MSH2-204ENST00000461394 MCEEQ96PE7 176 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 TSPAN18Q96SJ8 248 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 ELOVL4Q9GZR5 314 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 CARD9Q9H257 536 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 CXCL16Q9H2A7 254 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 ACBD3Q9H3P7 528 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 HMX1Q9NP08 348 aaPredicted RBP7.2□□□□□ -1.26
MSH2-204ENST00000461394 HESX1Q9UBX0 185 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 HMGXB4Q9UGU5 601 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 IP6K2Q9UHH9 426 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 MTUS1Q9ULD2 1270 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 PCDHGC3Q9UN70 934 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 SCN1AP35498 2009 aa7.2□□□□□ -1.26
MSH2-204ENST00000461394 C19orf67A6NJJ6 358 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 KPNA7A9QM74 516 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 KBTBD13C9JR72 458 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 PPEF2O14830 753 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 PROSCO94903 275 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 MYCP01106 439 aaPredicted RBP7.19□□□□□ -1.26
MSH2-204ENST00000461394 CHRNA1P02708 482 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 PDGFRBP09619 1106 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 KCNE1P15382 129 aa7.19□□□□□ -1.26
MSH2-204ENST00000461394 HSPA6P17066 643 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms