RNA–Protein interactions for RNA: ENST00000461127.5

TOP3A-202, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-202ENST00000461127 MEFVO15553 781 aaPredicted RBP18.68■□□□□ 0.58
TOP3A-202ENST00000461127 TOM1L1O75674 476 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 LARGE1O95461 756 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 CTDNEP1O95476 244 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 OR52Z1P0C646 297 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 ODC1P11926 461 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 CYP3A5P20815 502 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 RDXP35241 583 aaKnown RBP18.68■□□□□ 0.58
TOP3A-202ENST00000461127 PSMD2Q13200 908 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 MGAT5BQ3V5L5 792 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 KIAA1211LQ6NV74 962 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 TSTD1Q8NFU3 115 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 ZBTB45Q96K62 511 aaPredicted RBP18.68■□□□□ 0.58
TOP3A-202ENST00000461127 LPIN3Q9BQK8 851 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 MSRB2Q9Y3D2 182 aa18.68■□□□□ 0.58
TOP3A-202ENST00000461127 ZNF638Q14966 1978 aaKnown RBP18.68■□□□□ 0.58
TOP3A-202ENST00000461127 ASCC3Q8N3C0 2202 aaKnown RBP18.68■□□□□ 0.58
TOP3A-202ENST00000461127 OTOL1A6NHN0 477 aaPredicted RBP18.67■□□□□ 0.58
TOP3A-202ENST00000461127 HYAL3O43820 417 aaPredicted RBP18.67■□□□□ 0.58
TOP3A-202ENST00000461127 FDPSP14324 419 aaKnown RBP18.67■□□□□ 0.58
TOP3A-202ENST00000461127 DDX6P26196 483 aaKnown RBP eCLIP18.67■□□□□ 0.58
TOP3A-202ENST00000461127 MATR3P43243 847 aaKnown RBP eCLIP18.67■□□□□ 0.58
TOP3A-202ENST00000461127 LMAN2Q12907 356 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 PDGFRLQ15198 375 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 SEZ6Q53EL9 994 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 CPA6Q8N4T0 437 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 MAB21L3Q8N8X9 362 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 CHFRQ96EP1 664 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 C17orf75Q9HAS0 396 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 IL21Q9HBE4 155 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 TDP1Q9NUW8 608 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 KIAA1024Q9UPX6 916 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 INVSQ9Y283 1065 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 WDFY3Q8IZQ1 3526 aa18.67■□□□□ 0.58
TOP3A-202ENST00000461127 PCNX2A6NKB5 2137 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 CLDN3O15551 220 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 HIP1RO75146 1068 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 CLTAP09496 248 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 CXCL8P10145 99 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 ARSAP15289 507 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 PAX3P23760 479 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 IRX4P78413 519 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 PPP2R3AQ06190 1150 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 SPAG1Q07617 926 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 ORC2Q13416 577 aaPredicted RBP18.66■□□□□ 0.58
TOP3A-202ENST00000461127 USP13Q92995 863 aaPredicted RBP18.66■□□□□ 0.58
TOP3A-202ENST00000461127 CD101Q93033 1021 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 NUSAP1Q9BXS6 441 aaKnown RBP18.66■□□□□ 0.58
TOP3A-202ENST00000461127 FBRSL1Q9HCM7 1045 aaKnown RBP18.66■□□□□ 0.58
TOP3A-202ENST00000461127 KCNG1Q9UIX4 513 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 CCL26Q9Y258 94 aa18.66■□□□□ 0.58
TOP3A-202ENST00000461127 PATE3B3GLJ2 98 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 TAF4O00268 1085 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 SLC16A4O15374 487 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 ATF6P18850 670 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 GJA4P35212 333 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 DHPSP49366 369 aaPredicted RBP18.65■□□□□ 0.58
TOP3A-202ENST00000461127 FOSBP53539 338 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 SAFBQ15424 915 aaKnown RBP eCLIP18.65■□□□□ 0.58
TOP3A-202ENST00000461127 ECM1Q16610 540 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 SLC39A12Q504Y0 691 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 GIPC2Q8TF65 315 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 PIGKQ92643 395 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 DDX19AQ9NUU7 478 aaKnown RBP18.65■□□□□ 0.58
TOP3A-202ENST00000461127 EVLQ9UI08 416 aaPredicted RBP18.65■□□□□ 0.58
TOP3A-202ENST00000461127 TBX20Q9UMR3 447 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 DNM3Q9UQ16 869 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 STK24Q9Y6E0 443 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 NBEAQ8NFP9 2946 aa18.65■□□□□ 0.58
TOP3A-202ENST00000461127 TTC26A0AVF1 554 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 H0Y626 953 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 TRIM16O95361 564 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 U2AF2P26368 475 aaKnown RBP eCLIP18.64■□□□□ 0.57
TOP3A-202ENST00000461127 SMTNP53814 917 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 MCL1Q07820 350 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 SMARCB1Q12824 385 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 ANKRD1Q15327 319 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 ZBTB6Q15916 424 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 ZPBP2Q6X784 338 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 DAW1Q8N136 415 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 C2orf15Q8WU43 125 aaKnown RBP18.64■□□□□ 0.57
TOP3A-202ENST00000461127 MRPS31Q92665 395 aaKnown RBP18.64■□□□□ 0.57
TOP3A-202ENST00000461127 SENP8Q96LD8 212 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 TSPAN18Q96SJ8 248 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 TPSD1Q9BZJ3 242 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 LRWD1Q9UFC0 647 aa18.64■□□□□ 0.57
TOP3A-202ENST00000461127 NLRP12P59046 1061 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 LILRA4P59901 499 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 SIM1P81133 766 aaPredicted RBP18.63■□□□□ 0.57
TOP3A-202ENST00000461127 NR1H3Q13133 447 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 BECN1Q14457 450 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 ZNF174Q15697 407 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 KYAT1Q16773 422 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 TRIM61Q5EBN2 209 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 METTL23Q86XA0 190 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 HSCBQ8IWL3 235 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 TMEM130Q8N3G9 435 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 SPPL2BQ8TCT7 592 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 ECT2Q9H8V3 914 aa18.63■□□□□ 0.57
TOP3A-202ENST00000461127 KLK13Q9UKR3 277 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms