RNA–Protein interactions for RNA: ENST00000461018.5

CNN3-204, Transcript of calponin 3, humanhuman

TSL 2

Gene CNN3, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-204ENST00000461018 ENDOUP21128 410 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 ARL4AP40617 200 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 NOP2P46087 812 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 LINC00310P59036 64 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 CYP4F8P98187 520 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ITIH3Q06033 890 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 CSRP2Q16527 193 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 DGKDQ16760 1214 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 TKFCQ3LXA3 575 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 SBK1Q52WX2 424 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ATAT1Q5SQI0 421 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 FAM102BQ5T8I3 360 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 SYDE2Q5VT97 1194 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 SLFN13Q68D06 897 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 HEATR6Q6AI08 1181 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 KIAA1841Q6NSI8 718 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 KIAA1211LQ6NV74 962 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 DCLRE1AQ6PJP8 1040 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 KCTD1Q719H9 257 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 TAB3Q8N5C8 712 aaPredicted RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 COLGALT1Q8NBJ5 622 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 CLEC4DQ8WXI8 215 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 AUTS2Q8WXX7 1259 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 APPBP2Q92624 585 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ZBTB10Q96DT7 871 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 SPATA32Q96LK8 384 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 C16orf70Q9BSU1 422 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 LSM14BQ9BX40 385 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 SLC12A9Q9BXP2 914 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 SRRTQ9BXP5 876 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 BOLA2Q9H3K6 86 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ACBD3Q9H3P7 528 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ZNF287Q9HBT7 754 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 CRTAC1Q9NQ79 661 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ARHGEF3Q9NR81 526 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 TYW1Q9NV66 732 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 SETD4Q9NVD3 440 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 NYAP2Q9P242 653 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ANKFY1Q9P2R3 1169 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 IMPACTQ9P2X3 320 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ARPP21Q9UBL0 812 aaPredicted RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 FBXO4Q9UKT5 387 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 ISY1Q9ULR0 285 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 SYNPO2Q9UMS6 1093 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 INPP5FQ9Y2H2 1132 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 SF3B6Q9Y3B4 125 aaKnown RBP5.04□□□□□ -1.6
CNN3-204ENST00000461018 DOCK6Q96HP0 2047 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 SPTA1P02549 2419 aa5.04□□□□□ -1.6
CNN3-204ENST00000461018 MYH7P12883 1935 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 SALL3Q9BXA9 1300 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 FNDC1Q4ZHG4 1894 aaPredicted RBP5.03□□□□□ -1.6
CNN3-204ENST00000461018 C17orf102A2RUQ5 167 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 C2orf71A6NGG8 1288 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 MBD4O95243 580 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 MPOP05164 745 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 RETP07949 1114 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 SMIM10L2AP0DMW4 78 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 SMIM10L2BP0DMW5 78 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 MYBP10242 640 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 MCCP23508 829 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 HOXC8P31273 242 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 CD52P31358 61 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 VIPR1P32241 457 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 SOX9P48436 509 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 SLC7A5Q01650 507 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 MGAT3Q09327 533 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 ANKRD39Q53RE8 183 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 RTP2Q5QGT7 225 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 SPOUT1Q5T280 376 aaKnown RBP5.03□□□□□ -1.6
CNN3-204ENST00000461018 STPG1Q5TH74 334 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 XRRA1Q6P2D8 792 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 CTR9Q6PD62 1173 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 LRRC55Q6ZSA7 311 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 THNSL1Q8IYQ7 743 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 TMEM52Q8NDY8 209 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 RGS22Q8NE09 1264 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 STAG1Q8WVM7 1258 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 HNRNPLLQ8WVV9 542 aaKnown RBP5.03□□□□□ -1.6
CNN3-204ENST00000461018 CASP10Q92851 521 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 APBB2Q92870 758 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 ANAPC16Q96DE5 110 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 JMJD8Q96S16 334 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 MYADMQ96S97 322 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 STRBPQ96SI9 672 aaKnown RBP5.03□□□□□ -1.6
CNN3-204ENST00000461018 CWH43Q9H720 699 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 CCSER2Q9H7U1 834 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 ENTPD7Q9NQZ7 604 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 PRR13Q9NZ81 148 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 CCPG1Q9ULG6 757 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 CNOT6Q9ULM6 557 aaKnown RBP5.03□□□□□ -1.6
CNN3-204ENST00000461018 PIEZO2Q9H5I5 2752 aa5.03□□□□□ -1.6
CNN3-204ENST00000461018 SHROOM3Q8TF72 1996 aa5.02□□□□□ -1.61
CNN3-204ENST00000461018 TMEM8BA6NDV4 472 aa5.02□□□□□ -1.61
CNN3-204ENST00000461018 SHISA7A6NL88 538 aa5.02□□□□□ -1.61
CNN3-204ENST00000461018 TBKBP1A7MCY6 615 aa5.02□□□□□ -1.61
CNN3-204ENST00000461018 RNF113AO15541 343 aaKnown RBP5.02□□□□□ -1.61
CNN3-204ENST00000461018 FOXD2O60548 495 aaPredicted RBP5.02□□□□□ -1.61
CNN3-204ENST00000461018 SEMA7AO75326 666 aa5.02□□□□□ -1.61
CNN3-204ENST00000461018 PRDM1O75626 825 aa5.02□□□□□ -1.61
CNN3-204ENST00000461018 SRGAP2BP0DMP2 458 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms