RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 C12orf60Q5U649 245 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 BROXQ5VW32 411 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 NXNQ6DKJ4 435 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 STOX1Q6ZVD7 989 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 CTU1Q7Z7A3 348 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 RASAL3Q86YV0 1011 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 EGFL6Q8IUX8 553 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 KLHL36Q8N4N3 616 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 ACER1Q8TDN7 264 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 FAM122AQ96E09 287 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 ZSWIM3Q96MP5 696 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 BOCQ9BWV1 1114 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 RHOBTB2Q9BYZ6 727 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 LSG1Q9H089 658 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 NAPBQ9H115 298 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 R3HDMLQ9H3Y0 253 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 CD248Q9HCU0 757 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 GOLGA6AQ9NYA3 693 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 MYOTQ9UBF9 498 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 ST6GALNAC2Q9UJ37 374 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 WASF3Q9UPY6 502 aa5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 LUC7L2Q9Y383 392 aaKnown RBP5.49□□□□□ -1.53
ATPAF1-203ENST00000460928 ATAD5Q96QE3 1844 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 ZNF561-AS1K7EIQ3 104 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 MPHOSPH10O00566 681 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PRPF3O43395 683 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 DTNBO60941 627 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SNUPNO95149 360 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 MT-CO1P00395 513 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 GH2P01242 217 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 KRT18P05783 430 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 ZBTB48P10074 688 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 COL6A2P12110 1019 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 CPA1P15085 419 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PPP2CBP62714 309 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PPP2CAP67775 309 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 KIF23Q02241 960 aaPredicted RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 GABPAQ06546 454 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PPARAQ07869 468 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 HLTFQ14527 1009 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 ICAM4Q14773 271 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SEPT2Q15019 361 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PCBP2Q15366 365 aaKnown RBP eCLIP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 HS1BP3Q53T59 392 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 RRP12Q5JTH9 1297 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 KIAA1755Q5JYT7 1200 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 RGMBQ6NW40 437 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 CHST3Q7LGC8 479 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 GPATCH11Q8N954 259 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PMM1Q92871 262 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 FAXDC2Q96IV6 333 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SNX27Q96L92 541 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 TCEANC2Q96MN5 208 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 CDK5RAP1Q96SZ6 601 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 ZNF341Q9BYN7 854 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SLC13A1Q9BZW2 595 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SMURF1Q9HCE7 757 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 C14orf119Q9NWQ9 140 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PI4KBQ9UBF8 816 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 ASH2LQ9UBL3 628 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 FTSJ1Q9UET6 329 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SRRDQ9UH36 339 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SERPINB13Q9UIV8 391 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 ZNF112Q9UJU3 913 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 SPO11Q9Y5K1 396 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 RBM8AQ9Y5S9 174 aaKnown RBP5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 ZHX2Q9Y6X8 837 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 MYH8P13535 1937 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 PHIPQ8WWQ0 1821 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 NEDD4P46934 1319 aa5.48□□□□□ -1.53
ATPAF1-203ENST00000460928 LAMB1P07942 1786 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 CENPFP49454 3210 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 LOC102724159A0A0B4J2E5 919 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 A0A1W2PRG0 241 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 NPEPPSL1A6NEC2 478 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 TRIM75PA6NK02 468 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 KRIT1O00522 736 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 GPR42O15529 346 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 AMY2AP04746 511 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 HLA-DOAP06340 250 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 CYP21A2P08686 494 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 GNAT1P11488 350 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 COL6A1P12109 1028 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 SLC9A1P19634 815 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 AMY2BP19961 511 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 NF2P35240 595 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 SSR1P43307 286 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 SATB1Q01826 763 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 SPIRE1Q08AE8 756 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 PWP2Q15269 919 aaKnown RBP5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 TERF2Q15554 542 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 ZNF174Q15697 407 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 GFOD2Q3B7J2 385 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 SLFN13Q68D06 897 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 PGM2L1Q6PCE3 622 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 CASC1Q6TDU7 716 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 ARHGAP36Q6ZRI8 547 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 ARMC9Q7Z3E5 817 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 RASSF3Q86WH2 238 aa5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms