RNA–Protein interactions for RNA: ENST00000460677.5

PCYT1A-212, Transcript of phosphate cytidylyltransferase 1, choline, alpha, humanhuman

TSL 1 (best)

Gene PCYT1A, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCYT1A-212ENST00000460677 C3orf58Q8NDZ4 430 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 TPCN2Q8NHX9 752 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 VCPIP1Q96JH7 1222 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 SENP8Q96LD8 212 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 PAAF1Q9BRP4 392 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 MCOLN1Q9GZU1 580 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 LRFN2Q9ULH4 789 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 NME7Q9Y5B8 376 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 TDRD15B5MCY1 1934 aaKnown RBP16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 SCN5AQ14524 2016 aa16.83■□□□□ 0.28
PCYT1A-212ENST00000460677 GRID2IPA4D2P6 1211 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 O00370 1275 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 HOXA2O43364 376 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 C1QBPQ07021 282 aaKnown RBP16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 DSC1Q08554 894 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 DENND1BQ6P3S1 775 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 CNKSR3Q6P9H4 555 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 DCLRE1AQ6PJP8 1040 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 DSTYKQ6XUX3 929 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 ACOT1Q86TX2 421 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 CRYBG2Q8N1P7 616 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 TMEM86AQ8N2M4 240 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 C1orf131Q8NDD1 294 aaKnown RBP16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 RABGGTAQ92696 567 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 OSGEPQ9NPF4 335 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 AVENQ9NQS1 362 aaPredicted RBP16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 TBC1D13Q9NVG8 400 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 ADAM22Q9P0K1 906 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 CTTNBP2NLQ9P2B4 639 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 CNOT8Q9UFF9 292 aaKnown RBP16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 STXBP5LQ9Y2K9 1186 aa16.82■□□□□ 0.28
PCYT1A-212ENST00000460677 ENC1O14682 589 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 GABRDO14764 452 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 B3GAT3O94766 335 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 MTA2O94776 668 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 MICAL2O94851 1124 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 TIMP1P01033 207 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 ATP1A1P05023 1023 aaKnown RBP16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 MMP8P22894 467 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 TUBB2AQ13885 445 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 LIN9Q5TKA1 542 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 PAPD7Q5XG87 772 aaKnown RBP16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 WSCD1Q658N2 575 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 LCLAT1Q6UWP7 414 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 CD300LGQ6UXG3 332 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 OSTM1Q86WC4 334 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 ZNF280BQ86YH2 543 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 NPAS4Q8IUM7 802 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 ABI1Q8IZP0 508 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 CRIPAKQ8N1N5 446 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 WDTC1Q8N5D0 677 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 LRRC57Q8N9N7 239 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 CASD1Q96PB1 797 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 TUBB2BQ9BVA1 445 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 L2HGDHQ9H9P8 463 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 UVRAGQ9P2Y5 699 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 COG5Q9UP83 839 aa16.81■□□□□ 0.28
PCYT1A-212ENST00000460677 TRIM43BA6NCK2 446 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 KIAA0355O15063 1070 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 ATMINO43313 823 aaPredicted RBP16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 DDHD2O94830 711 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 CALB1P05937 261 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 PDGFRBP09619 1106 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 LMO2P25791 158 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 LHX1P48742 406 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 AMPD2Q01433 879 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 RNASELQ05823 741 aaKnown RBP16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 PTP4A2Q12974 167 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 IKBKEQ14164 716 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 TIGD5Q53EQ6 642 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 ARHGAP17Q68EM7 881 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 MMS22LQ6ZRQ5 1243 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 SLFN11Q7Z7L1 901 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 COLGALT2Q8IYK4 626 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 SYCE1Q8N0S2 351 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 C12orf29Q8N999 325 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 TET1Q8NFU7 2136 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 SPATA18Q8TC71 538 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 RSPH1Q8WYR4 309 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 TRIM43Q96BQ3 446 aaPredicted RBP16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 TNIP3Q96KP6 325 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 FAM193BQ96PV7 902 aaPredicted RBP16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 C11orf70Q9BRQ4 267 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 NUP85Q9BW27 656 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 DPEP3Q9H4B8 488 aa16.8■□□□□ 0.28
PCYT1A-212ENST00000460677 M0QYV0 167 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 RIOK3O14730 519 aaKnown RBP16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 HCRTO43612 131 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 B4GALT3O60512 393 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 ODC1P11926 461 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 RRM1P23921 792 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 PPP1R26Q5T8A7 1209 aaPredicted RBP16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 ERICH1Q86X53 443 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 ZNF564Q8TBZ8 553 aaPredicted RBP16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 VWCEQ96DN2 955 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 PRDM5Q9NQX1 630 aaPredicted RBP16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 TSPAN16Q9UKR8 245 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 TTC3P53804 2025 aa16.79■□□□□ 0.28
PCYT1A-212ENST00000460677 ARHGEF37A1IGU5 675 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms