RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 CCNG2Q16589 344 aa15.45■□□□□ 0.06
PTPRU-205ENST00000460170 URGCPQ8TCY9 931 aa15.45■□□□□ 0.06
PTPRU-205ENST00000460170 PDCD6IPQ8WUM4 868 aaKnown RBP15.45■□□□□ 0.06
PTPRU-205ENST00000460170 MKL1Q969V6 931 aa15.45■□□□□ 0.06
PTPRU-205ENST00000460170 ABT1Q9ULW3 272 aaKnown RBP15.45■□□□□ 0.06
PTPRU-205ENST00000460170 CUL3Q13618 768 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 NIPA1Q7RTP0 329 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 KRT35Q92764 455 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 TATDN2Q93075 761 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 DNAJC19Q96DA6 116 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 BNIP3LO60238 219 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 NSUN2Q08J23 767 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTPRU-205ENST00000460170 EFHC1Q5JVL4 640 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 TTC39BQ5VTQ0 682 aaPredicted RBP15.44■□□□□ 0.06
PTPRU-205ENST00000460170 ZBTB18Q99592 522 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 OSBPL1AQ9BXW6 950 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 MANSC1Q9H8J5 431 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 C3P01024 1663 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 EEF2KO00418 725 aaKnown RBP15.44■□□□□ 0.06
PTPRU-205ENST00000460170 WNT7AO00755 349 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 PPFIA2O75334 1257 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 NLRP11P59045 1033 aaKnown RBP15.44■□□□□ 0.06
PTPRU-205ENST00000460170 EFTUD2Q15029 972 aaKnown RBP eCLIP15.44■□□□□ 0.061e-6■■■■■ 38.8
PTPRU-205ENST00000460170 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.44■□□□□ 0.06
PTPRU-205ENST00000460170 MPZL3Q6UWV2 235 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 IQCA1LA6NCM1 817 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 FAM153BP0C7A2 387 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 KRT4P19013 534 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 EEF1B2P24534 225 aaKnown RBP15.44■□□□□ 0.06
PTPRU-205ENST00000460170 CXCL9Q07325 125 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 FAM153CQ494X1 144 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 ARHGEF19Q8IW93 802 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 NDUFAF2Q8N183 169 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 KIAA1683Q9H0B3 1180 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 SEMA4AQ9H3S1 761 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 FAM153AQ9UHL3 310 aa15.44■□□□□ 0.06
PTPRU-205ENST00000460170 CYP2C9P11712 490 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 AARSP49588 968 aaKnown RBP eCLIP15.43■□□□□ 0.06
PTPRU-205ENST00000460170 EVX2Q03828 476 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 UGP2Q16851 508 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 DCAF6Q58WW2 860 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 RABGAP1LQ5R372 815 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 ANKRD13AQ8IZ07 590 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 SPON2Q9BUD6 331 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 L3MBTL1Q9Y468 752 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 SLIT3O75094 1523 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 PDE2AO00408 941 aaPredicted RBP15.43■□□□□ 0.06
PTPRU-205ENST00000460170 ZBTB39O15060 712 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 SOX10P56693 466 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 DDR1Q08345 913 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 DNAL1Q4LDG9 190 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 KCNT1Q5JUK3 1230 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 FRA10AC1Q70Z53 315 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 ANO5Q75V66 913 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 GTF3C2Q8WUA4 911 aaPredicted RBP15.43■□□□□ 0.06
PTPRU-205ENST00000460170 SPIRE2Q8WWL2 714 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 TNFRSF25Q93038 417 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 GDF3Q9NR23 364 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 CCND1P24385 295 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 PRKCIP41743 596 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 SV2CQ496J9 727 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 TMTC4Q5T4D3 741 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 ABRAQ8N0Z2 381 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 GIPC2Q8TF65 315 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 IGF2BP3O00425 579 aaKnown RBP eCLIP15.43■□□□□ 0.06
PTPRU-205ENST00000460170 EPHB6O15197 1021 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 PSMD3O43242 534 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 LSM8O95777 96 aaKnown RBP15.43■□□□□ 0.06
PTPRU-205ENST00000460170 HNRNPH1P31943 449 aaKnown RBP15.43■□□□□ 0.06
PTPRU-205ENST00000460170 SPRP35270 261 aaPredicted RBP15.43■□□□□ 0.06
PTPRU-205ENST00000460170 TEDDM1Q5T9Z0 273 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 MCOLN2Q8IZK6 566 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 CISHQ9NSE2 258 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 GRID1Q9ULK0 1009 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 KIF1AQ12756 1690 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 MON2Q7Z3U7 1717 aa15.43■□□□□ 0.06
PTPRU-205ENST00000460170 TRIM49D1C9J1S8 452 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 CYP2C8P10632 490 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 GNL1P36915 607 aaPredicted RBP15.42■□□□□ 0.06
PTPRU-205ENST00000460170 CLCN3P51790 818 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 CASP5P51878 434 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 KCNA1Q09470 495 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 MDH1BQ5I0G3 518 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 HABP4Q5JVS0 413 aaKnown RBP15.42■□□□□ 0.06
PTPRU-205ENST00000460170 LRRC6Q86X45 466 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 PPHLN1Q8NEY8 458 aaKnown RBP15.42■□□□□ 0.06
PTPRU-205ENST00000460170 GPRC5AQ8NFJ5 357 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 TRPV6Q9H1D0 765 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 XAB2Q9HCS7 855 aaKnown RBP15.42■□□□□ 0.06
PTPRU-205ENST00000460170 KIAA1257Q9ULG3 409 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 POLBP06746 335 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 VDRP11473 427 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 OTUD4Q01804 1114 aaKnown RBP15.42■□□□□ 0.06
PTPRU-205ENST00000460170 ITIH4Q14624 930 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 CBWD6Q4V339 395 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 CBWD3Q5JTY5 395 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 CBWD5Q5RIA9 395 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 ZNF662Q6ZS27 426 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 C1orf186Q6ZWK4 172 aa15.42■□□□□ 0.06
PTPRU-205ENST00000460170 TMC3Q7Z5M5 1100 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms