RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 NOD1Q9Y239 953 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 CITO14578 2027 aa11.02□□□□□ -0.65
HERC4-207ENST00000460168 CEP104O60308 925 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SGPL1O95470 568 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 YARSP54577 528 aaKnown RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 MYL6P60660 151 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 TMEM132DQ14C87 1099 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 PTGISQ16647 500 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 ZNF699Q32M78 642 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SERINC5Q86VE9 423 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SESTD1Q86VW0 696 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 LMNTD2Q8IXW0 634 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 TRIM58Q8NG06 486 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 LNX1Q8TBB1 728 aaPredicted RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 SLC20A1Q8WUM9 679 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SPDL1Q96EA4 605 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 MPP4Q96JB8 637 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 GLT1D1Q96MS3 346 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 AGPAT1Q99943 283 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 EIF2AQ9BY44 585 aaKnown RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 ACP6Q9NPH0 428 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 COMMD8Q9NX08 183 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SNTG2Q9NY99 539 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 ZMAT5Q9UDW3 170 aaKnown RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 PTCH2Q9Y6C5 1203 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 CDY2AQ9Y6F7 541 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 TACC1O75410 805 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 MTRF1O75570 445 aaKnown RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 CABYRO75952 493 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 RPLP2P05387 115 aaKnown RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 CYP11B1P15538 503 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 ACLYP53396 1101 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 ITGA7Q13683 1181 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SMUG1Q53HV7 270 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SCARA3Q6AZY7 606 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 NOP9Q86U38 636 aaKnown RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 NAPGQ99747 312 aaPredicted RBP11.01□□□□□ -0.65
HERC4-207ENST00000460168 SYT11Q9BT88 431 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 CAPS2Q9BXY5 557 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 HES2Q9Y543 173 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 PCDHGC5Q9Y5F6 944 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 SPO11Q9Y5K1 396 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 TRPV2Q9Y5S1 764 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 GRIN2DO15399 1336 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 UMODL1Q5DID0 1318 aa11.01□□□□□ -0.65
HERC4-207ENST00000460168 MEFVO15553 781 aaPredicted RBP11□□□□□ -0.65
HERC4-207ENST00000460168 BUB1O43683 1085 aa11□□□□□ -0.65
HERC4-207ENST00000460168 MOCS3O95396 460 aa11□□□□□ -0.65
HERC4-207ENST00000460168 ITGB3P05106 788 aa11□□□□□ -0.65
HERC4-207ENST00000460168 H2AFZP0C0S5 128 aa11□□□□□ -0.65
HERC4-207ENST00000460168 IL4RP24394 825 aa11□□□□□ -0.65
HERC4-207ENST00000460168 THPOP40225 353 aa11□□□□□ -0.65
HERC4-207ENST00000460168 SCNN1BP51168 640 aa11□□□□□ -0.65
HERC4-207ENST00000460168 INHBCP55103 352 aa11□□□□□ -0.65
HERC4-207ENST00000460168 BTG3Q14201 252 aaPredicted RBP11□□□□□ -0.65
HERC4-207ENST00000460168 TWF2Q6IBS0 349 aaKnown RBP11□□□□□ -0.65
HERC4-207ENST00000460168 TMEM270Q6UE05 265 aa11□□□□□ -0.65
HERC4-207ENST00000460168 H2AFVQ71UI9 128 aa11□□□□□ -0.65
HERC4-207ENST00000460168 DNAAF5Q86Y56 855 aa11□□□□□ -0.65
HERC4-207ENST00000460168 CD302Q8IX05 232 aa11□□□□□ -0.65
HERC4-207ENST00000460168 C1orf127Q8N9H9 656 aa11□□□□□ -0.65
HERC4-207ENST00000460168 SLC30A5Q8TAD4 765 aa11□□□□□ -0.65
HERC4-207ENST00000460168 WNT8BQ93098 351 aa11□□□□□ -0.65
HERC4-207ENST00000460168 KIF12Q96FN5 646 aa11□□□□□ -0.65
HERC4-207ENST00000460168 NOX5Q96PH1 765 aa11□□□□□ -0.65
HERC4-207ENST00000460168 RUFY1Q96T51 708 aa11□□□□□ -0.65
HERC4-207ENST00000460168 APOL6Q9BWW8 343 aa11□□□□□ -0.65
HERC4-207ENST00000460168 NIF3L1Q9GZT8 377 aa11□□□□□ -0.65
HERC4-207ENST00000460168 NXF3Q9H4D5 531 aaKnown RBP11□□□□□ -0.65
HERC4-207ENST00000460168 C2CD2Q9Y426 696 aa11□□□□□ -0.65
HERC4-207ENST00000460168 PCDHB4Q9Y5E5 795 aa11□□□□□ -0.65
HERC4-207ENST00000460168 CAPN6Q9Y6Q1 641 aa11□□□□□ -0.65
HERC4-207ENST00000460168 FAM170AA1A519 330 aa11□□□□□ -0.65
HERC4-207ENST00000460168 MOXD2PA6NHM9 499 aa11□□□□□ -0.65
HERC4-207ENST00000460168 ENO4A6NNW6 628 aa11□□□□□ -0.65
HERC4-207ENST00000460168 RNF8O76064 485 aa11□□□□□ -0.65
HERC4-207ENST00000460168 NFX1Q12986 1120 aaKnown RBP11□□□□□ -0.65
HERC4-207ENST00000460168 FOXR1Q6PIV2 292 aa11□□□□□ -0.65
HERC4-207ENST00000460168 FAM228AQ86W67 206 aa11□□□□□ -0.65
HERC4-207ENST00000460168 PALB2Q86YC2 1186 aa11□□□□□ -0.65
HERC4-207ENST00000460168 RNF10Q8N5U6 811 aaKnown RBP11□□□□□ -0.65
HERC4-207ENST00000460168 USP33Q8TEY7 942 aa11□□□□□ -0.65
HERC4-207ENST00000460168 PLEKHA5Q9HAU0 1116 aa11□□□□□ -0.65
HERC4-207ENST00000460168 ARGLU1Q9NWB6 273 aaPredicted RBP11□□□□□ -0.65
HERC4-207ENST00000460168 NXF1Q9UBU9 619 aaKnown RBP11□□□□□ -0.65
HERC4-207ENST00000460168 SALL4Q9UJQ4 1053 aa11□□□□□ -0.65
HERC4-207ENST00000460168 NOCTQ9UK39 431 aaKnown RBP11□□□□□ -0.65
HERC4-207ENST00000460168 NOC2LQ9Y3T9 749 aaKnown RBP11□□□□□ -0.65
HERC4-207ENST00000460168 ENC1O14682 589 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 RECQL4O94761 1208 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 ABCB4P21439 1286 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 BPIFB4P59827 614 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 MYBPC3Q14896 1274 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 WDR72Q3MJ13 1102 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 LHX8Q68G74 356 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 SCARA5Q6ZMJ2 495 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 NT5DC4Q86YG4 428 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 RNF168Q8IYW5 571 aaPredicted RBP10.99□□□□□ -0.65
HERC4-207ENST00000460168 OLIG1Q8TAK6 271 aa10.99□□□□□ -0.65
HERC4-207ENST00000460168 SH3TC2Q8TF17 1288 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 98.3 ms