RNA–Protein interactions for RNA: ENST00000460162.1

PTPN4-207, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-207ENST00000460162 PDIA4P13667 645 aaKnown RBP24.53■■□□□ 1.52
PTPN4-207ENST00000460162 CDC25CP30307 473 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 MLLT6P55198 1093 aaPredicted RBP24.53■■□□□ 1.52
PTPN4-207ENST00000460162 TSPY1Q01534 308 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 C1orf228Q6PIY5 440 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 YAF2Q8IY57 180 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 ZNF687Q8N1G0 1237 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 RSPRY1Q96DX4 576 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 GCNAQ96QF7 691 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 TRIM9Q9C026 710 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 OBP2AQ9NY56 170 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 ABI2Q9NYB9 513 aaPredicted RBP24.53■■□□□ 1.52
PTPN4-207ENST00000460162 AGAP1Q9UPQ3 857 aa24.53■■□□□ 1.52
PTPN4-207ENST00000460162 GOLGA8IPA6NC78 632 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 GOLGA8JA6NMD2 632 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 CHADO15335 359 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 CUTAO60888 179 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 HAPLN1P10915 354 aaPredicted RBP24.52■■□□□ 1.52
PTPN4-207ENST00000460162 AMPD3Q01432 767 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 FZD5Q13467 585 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 GPR158Q5T848 1215 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 LRRTM3Q86VH5 581 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 ARID3BQ8IVW6 561 aaPredicted RBP24.52■■□□□ 1.52
PTPN4-207ENST00000460162 TMEM86AQ8N2M4 240 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 PDCL2Q8N4E4 241 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 CXorf38Q8TB03 319 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 SPATA18Q8TC71 538 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 LEO1Q8WVC0 666 aaPredicted RBP24.52■■□□□ 1.52
PTPN4-207ENST00000460162 FAM3CQ92520 227 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 PRMT8Q9NR22 394 aaPredicted RBP24.52■■□□□ 1.52
PTPN4-207ENST00000460162 ZMYM5Q9UJ78 669 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 NDRG2Q9UN36 371 aaKnown RBP24.52■■□□□ 1.52
PTPN4-207ENST00000460162 WDR87Q6ZQQ6 2873 aa24.52■■□□□ 1.52
PTPN4-207ENST00000460162 OTOGLQ3ZCN5 2332 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 EP300Q09472 2414 aaPredicted RBP24.51■■□□□ 1.51
PTPN4-207ENST00000460162 EIF3DO15371 548 aaKnown RBP eCLIP24.51■■□□□ 1.51
PTPN4-207ENST00000460162 KINO60870 393 aaKnown RBP24.51■■□□□ 1.51
PTPN4-207ENST00000460162 HUS1O60921 280 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 TMEM191BP0C7N4 346 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 WEE1P30291 646 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 NFE2Q16621 373 aaPredicted RBP24.51■■□□□ 1.51
PTPN4-207ENST00000460162 CNNM4Q6P4Q7 775 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 IQUBQ8NA54 791 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 CSGALNACT1Q8TDX6 532 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 MTMR12Q9C0I1 747 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 CHRDQ9H2X0 955 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 PCIF1Q9H4Z3 704 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 MAGEF1Q9HAY2 307 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 IL21Q9HBE4 155 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 PDE11AQ9HCR9 933 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 GDAP2Q9NXN4 497 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 L1RE1Q9UN81 338 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 PCDHB5Q9Y5E4 795 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 PCDHGA2Q9Y5H1 932 aa24.51■■□□□ 1.51
PTPN4-207ENST00000460162 DPYSL4O14531 572 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 BFSP1Q12934 665 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 TAF12Q16514 161 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 SHC4Q6S5L8 630 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 HSCBQ8IWL3 235 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 NOC3LQ8WTT2 800 aaKnown RBP24.5■■□□□ 1.51
PTPN4-207ENST00000460162 DHX58Q96C10 678 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 ACBD6Q9BR61 282 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 TASP1Q9H6P5 420 aa24.5■■□□□ 1.51
PTPN4-207ENST00000460162 TFIP11Q9UBB9 837 aaKnown RBP24.5■■□□□ 1.51
PTPN4-207ENST00000460162 TULP1O00294 542 aaPredicted RBP24.49■■□□□ 1.51
PTPN4-207ENST00000460162 ASIC1P78348 528 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 RBP5P82980 135 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 CYP4F8P98187 520 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 MYL7Q01449 175 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 CSTF1Q05048 431 aaKnown RBP24.49■■□□□ 1.51
PTPN4-207ENST00000460162 SURF1Q15526 300 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 ARHGAP29Q52LW3 1261 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 INTS6LQ5JSJ4 861 aaKnown RBP24.49■■□□□ 1.51
PTPN4-207ENST00000460162 CSGALNACT2Q8N6G5 542 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 GLIS3Q8NEA6 775 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 ANKRD36BP1Q96IX9 119 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 C8orf33Q9H7E9 229 aaPredicted RBP24.49■■□□□ 1.51
PTPN4-207ENST00000460162 ABCB6Q9NP58 842 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 DDX43Q9NXZ2 648 aaKnown RBP24.49■■□□□ 1.51
PTPN4-207ENST00000460162 SIX4Q9UIU6 781 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 UBE4BO95155 1302 aa24.49■■□□□ 1.51
PTPN4-207ENST00000460162 KRT19P08727 400 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 MTAPQ13126 283 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 TOP6BLQ8N6T0 577 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 GIPC2Q8TF65 315 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 NELL1Q92832 810 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 HPS3Q969F9 1004 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 KIAA1586Q9HCI6 787 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 TMLHEQ9NVH6 421 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 INTS13Q9NVM9 706 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 SNX9Q9Y5X1 595 aa24.48■■□□□ 1.51
PTPN4-207ENST00000460162 FRYLO94915 3013 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 ZNF233A6NK53 670 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 PRAMEF12O95522 483 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 HSP90AA1P07900 732 aaKnown RBP24.47■■□□□ 1.51
PTPN4-207ENST00000460162 ZSCAN22P10073 491 aaPredicted RBP24.47■■□□□ 1.51
PTPN4-207ENST00000460162 CDR1P51861 262 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 MYO1EQ12965 1108 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 FAM26FQ5R3K3 315 aa24.47■■□□□ 1.51
PTPN4-207ENST00000460162 MAMSTRQ6ZN01 415 aa24.47■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms