RNA–Protein interactions for RNA: ENST00000459860.1

SSNA1-202, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 1 (best)

Gene SSNA1, Length 1,170 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-202ENST00000459860 M0R296 226 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 FGFR1OPO95684 399 aaKnown RBP23.31■■□□□ 1.32
SSNA1-202ENST00000459860 PCSK1P29120 753 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 GTF2H1P32780 548 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 GCLMP48507 274 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 MRE11P49959 708 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 STX17P56962 302 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 SMARCB1Q12824 385 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 SOWAHAQ2M3V2 549 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 CCDC40Q4G0X9 1142 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 SLC39A12Q504Y0 691 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 ZNF667Q5HYK9 610 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 CCDC150Q8NCX0 1101 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 TAF4BQ92750 862 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 RPGRIP1Q96KN7 1286 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 PGLYRP2Q96PD5 576 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 ZCWPW1Q9H0M4 648 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 TMEM8AQ9HCN3 771 aa23.31■■□□□ 1.32
SSNA1-202ENST00000459860 NXF1Q9UBU9 619 aaKnown RBP23.31■■□□□ 1.32
SSNA1-202ENST00000459860 TECTAO75443 2155 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 CCL16O15467 120 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 PAPLNO95428 1278 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 POU2F2P09086 479 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 SGSM1Q2NKQ1 1148 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 C1orf220Q5T0J3 134 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 KRT39Q6A163 491 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 FILIP1Q7Z7B0 1213 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 ELMOD1Q8N336 334 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 C2orf15Q8WU43 125 aaKnown RBP23.3■■□□□ 1.32
SSNA1-202ENST00000459860 ZNF707Q96C28 371 aaPredicted RBP23.3■■□□□ 1.32
SSNA1-202ENST00000459860 TMEM209Q96SK2 561 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 ACBD6Q9BR61 282 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 VRTNQ9H8Y1 702 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 RWDD2AQ9UIY3 292 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 INSL5Q9Y5Q6 135 aa23.3■■□□□ 1.32
SSNA1-202ENST00000459860 MTMR11A4FU01 709 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 VNN1O95497 513 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 MXI1P50539 228 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 PPP3CAQ08209 521 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 PLD1Q13393 1074 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 PRSS33Q8NF86 280 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 DUSP9Q99956 384 aaKnown RBP23.29■■□□□ 1.32
SSNA1-202ENST00000459860 RTP3Q9BQQ7 232 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 XYLT2Q9H1B5 865 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 SNX25Q9H3E2 840 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 CLUHO75153 1309 aa23.29■■□□□ 1.32
SSNA1-202ENST00000459860 SEC24AO95486 1093 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 GNA14O95837 355 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 HLA-DRAP01903 254 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 FAM163BP0C2L3 166 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 WARSP23381 471 aaKnown RBP23.28■■□□□ 1.32
SSNA1-202ENST00000459860 NFE2Q16621 373 aaPredicted RBP23.28■■□□□ 1.32
SSNA1-202ENST00000459860 IER5LQ5T953 404 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 FRMD5Q7Z6J6 570 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 TDRD5Q8NAT2 981 aaKnown RBP23.28■■□□□ 1.32
SSNA1-202ENST00000459860 SPPL2BQ8TCT7 592 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 PBXIP1Q96AQ6 731 aa23.28■■□□□ 1.32
SSNA1-202ENST00000459860 ACSF2Q96CM8 615 aaPredicted RBP23.28■■□□□ 1.32
SSNA1-202ENST00000459860 WDR6Q9NNW5 1121 aaKnown RBP23.28■■□□□ 1.32
SSNA1-202ENST00000459860 GABRDO14764 452 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 TACC1O75410 805 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 ACAT1P24752 427 aaKnown RBP23.27■■□□□ 1.32
SSNA1-202ENST00000459860 NLRP12P59046 1061 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 DUSP4Q13115 394 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 TPD52L1Q16890 204 aaPredicted RBP23.27■■□□□ 1.32
SSNA1-202ENST00000459860 INTS6LQ5JSJ4 861 aaKnown RBP23.27■■□□□ 1.32
SSNA1-202ENST00000459860 LIMS2Q7Z4I7 341 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 OSTM1Q86WC4 334 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 OR6B3Q8NGW1 331 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 KBTBD7Q8WVZ9 684 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 ASIC4Q96FT7 647 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 HSFX1Q9UBD0 423 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 CDH9Q9ULB4 789 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 YIPF1Q9Y548 306 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 ZNF318Q5VUA4 2279 aa23.27■■□□□ 1.32
SSNA1-202ENST00000459860 ASS1P00966 412 aaKnown RBP23.26■■□□□ 1.31
SSNA1-202ENST00000459860 SP100P23497 879 aaPredicted RBP23.26■■□□□ 1.31
SSNA1-202ENST00000459860 ALDH1A3P47895 512 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 TUFMP49411 452 aaKnown RBP23.26■■□□□ 1.31
SSNA1-202ENST00000459860 MCCD1P59942 119 aaPredicted RBP23.26■■□□□ 1.31
SSNA1-202ENST00000459860 TWF1Q12792 350 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 IQCEQ6IPM2 695 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 SCARA5Q6ZMJ2 495 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 OTOP3Q7RTS5 596 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 GRASPQ7Z6J2 395 aaPredicted RBP23.26■■□□□ 1.31
SSNA1-202ENST00000459860 TAS1R2Q8TE23 839 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 SYT15Q9BQS2 421 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 SRRTQ9BXP5 876 aaKnown RBP23.26■■□□□ 1.31
SSNA1-202ENST00000459860 ABI2Q9NYB9 513 aaPredicted RBP23.26■■□□□ 1.31
SSNA1-202ENST00000459860 USTQ9Y2C2 406 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 PCDHB5Q9Y5E4 795 aa23.26■■□□□ 1.31
SSNA1-202ENST00000459860 CCDC192P0DO97 292 aa23.25■■□□□ 1.31
SSNA1-202ENST00000459860 GNL1P36915 607 aaPredicted RBP23.25■■□□□ 1.31
SSNA1-202ENST00000459860 EPHB3P54753 998 aa23.25■■□□□ 1.31
SSNA1-202ENST00000459860 SIGLEC14Q08ET2 396 aa23.25■■□□□ 1.31
SSNA1-202ENST00000459860 MAPRE1Q15691 268 aaKnown RBP23.25■■□□□ 1.31
SSNA1-202ENST00000459860 MGAT5BQ3V5L5 792 aa23.25■■□□□ 1.31
SSNA1-202ENST00000459860 CCDC183Q5T5S1 534 aa23.25■■□□□ 1.31
SSNA1-202ENST00000459860 ATAD1Q8NBU5 361 aa23.25■■□□□ 1.31
SSNA1-202ENST00000459860 FBXL13Q8NEE6 735 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms