RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 SMC1AQ14683 1233 aaKnown RBP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 RPS6KA1Q15418 735 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 TAF12Q16514 161 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 HADHQ16836 314 aaKnown RBP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 CLEC16AQ2KHT3 1053 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 NAA35Q5VZE5 725 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 HGSNATQ68CP4 663 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 OVOS1Q6IE37 1185 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 PSRC1Q6PGN9 363 aaPredicted RBP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 ELMSAN1Q6PJG2 1045 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 AGMOQ6ZNB7 445 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 ACOT1Q86TX2 421 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 NOP9Q86U38 636 aaKnown RBP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZDHHC17Q8IUH5 632 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SPATA2LQ8IUW3 424 aaPredicted RBP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 TMEM139Q8IV31 216 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SIX6OS1Q8N1H7 587 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 CEP112Q8N8E3 955 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC35G2Q8TBE7 412 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 WNT8BQ93098 351 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 C18orf8Q96DM3 657 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 TMEM169Q96HH4 297 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SENP8Q96LD8 212 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 KREMEN1Q96MU8 473 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 YME1L1Q96TA2 773 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 TMEM175Q9BSA9 504 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 LRRC4Q9HBW1 653 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 TMEM51Q9NW97 253 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 DDX43Q9NXZ2 648 aaKnown RBP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 EHD2Q9NZN4 543 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 RNF14Q9UBS8 474 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 CNOT8Q9UFF9 292 aaKnown RBP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 TUBGCP4Q9UGJ1 667 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 IP6K2Q9UHH9 426 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SIX4Q9UIU6 781 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 CDH9Q9ULB4 789 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 PCDHGC3Q9UN70 934 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 POLIQ9UNA4 740 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 CNTN6Q9UQ52 1028 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 RWDD3Q9Y3V2 267 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SAR1BQ9Y6B6 198 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SCN5AQ14524 2016 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 SF3B1O75533 1304 aaKnown RBP eCLIP6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 PTPRJQ12913 1337 aa6.19□□□□□ -1.42
RNU1-88P-201ENST00000459274 TTC3P53804 2025 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 GOLGA6L10A0A0M3HER8 536 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 MIF4GDA9UHW6 222 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 CAPN9O14815 690 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 SYN3O14994 580 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 KIAA0355O15063 1070 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 PJA2O43164 708 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 BUB1O43683 1085 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 NBNO60934 754 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 CXCL10P02778 98 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 FAM200BP0CF97 657 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 PNMA6AP0CW24 399 aaPredicted RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 FGFR1P11362 822 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 CPB1P15086 417 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 PTPN1P18031 435 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 LAG3P18627 525 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 TYMPP19971 482 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 WARSP23381 471 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 BRD2P25440 801 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ELF1P32519 619 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 SLC1A1P43005 524 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 RAP1GAPP47736 663 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 GUCY2FP51841 1108 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 RAD23BP54727 409 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 CDH8P55286 799 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 INCA1Q0VD86 236 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 BST2Q10589 180 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 PIGHQ14442 188 aaPredicted RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF268Q14587 947 aaPredicted RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 NFE2Q16621 373 aaPredicted RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 UPP1Q16831 310 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 LRRC26Q2I0M4 334 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 SOWAHAQ2M3V2 549 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 EFHC1Q5JVL4 640 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 OR6B2Q6IFH4 312 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF280DQ6N043 979 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 DNAJC24Q6P3W2 148 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ANKS3Q6ZW76 656 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 SND1Q7KZF4 910 aaKnown RBP eCLIP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 GPIHBP1Q8IV16 184 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 PASD1Q8IV76 773 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 REXO1L1PQ8IX06 675 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 CRYBG2Q8N1P7 616 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 B3GALNT2Q8NCR0 500 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 C1orf131Q8NDD1 294 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 DIS3LQ8TF46 1054 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 MAIP1Q8WWC4 291 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 CPA5Q8WXQ8 436 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 RPGRIP1Q96KN7 1286 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZMAT2Q96NC0 199 aaKnown RBP6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ZNF558Q96NG5 402 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ARID3AQ99856 593 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 ACBD6Q9BR61 282 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 NUP85Q9BW27 656 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 XYLT2Q9H1B5 865 aa6.18□□□□□ -1.42
RNU1-88P-201ENST00000459274 WNT8AQ9H1J5 351 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms