RNA–Protein interactions for RNA: ENST00000458707.1

VPS50-208, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 1,898 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-208ENST00000458707 TRIM72Q6ZMU5 477 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 SV2AQ7L0J3 742 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 NLRP9Q7RTR0 991 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 OTOAQ7RTW8 1153 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 USP37Q86T82 979 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 TNS4Q8IZW8 715 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 ZNF276Q8N554 614 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 RBBP8NLQ8NC74 664 aaPredicted RBP8.96□□□□□ -0.97
VPS50-208ENST00000458707 TMEM161BQ8NDZ6 487 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 CCDC127Q96BQ5 260 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 FAM167BQ9BTA0 163 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 HEMGNQ9BXL5 484 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 DENND2DQ9H6A0 471 aaPredicted RBP8.96□□□□□ -0.97
VPS50-208ENST00000458707 MRPL47Q9HD33 250 aaKnown RBP8.96□□□□□ -0.97
VPS50-208ENST00000458707 KCNH7Q9NS40 1196 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 SERPINA10Q9UK55 444 aa8.96□□□□□ -0.97
VPS50-208ENST00000458707 DRG1Q9Y295 367 aaKnown RBP8.96□□□□□ -0.97
VPS50-208ENST00000458707 FER1L6Q2WGJ9 1857 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 DPPA5A6NC42 116 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 SIGLEC16A6NMB1 481 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 FGFR1P11362 822 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 KRT5P13647 590 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 CA4P22748 312 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 MARK3P27448 753 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 YWHABP31946 246 aaKnown RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 PTPN7P35236 360 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 ECE1P42892 770 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 NSFP46459 744 aaKnown RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 CLDN10P78369 228 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 RNASELQ05823 741 aaKnown RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 TSNAXIP1Q2TAA8 658 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 TAF1BQ53T94 588 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 EAPPQ56P03 285 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 EFHC2Q5JST6 749 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 COL13A1Q5TAT6 717 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 STRIP1Q5VSL9 837 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 PLEKHA7Q6IQ23 1121 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 SLC39A4Q6P5W5 647 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 CCDC174Q6PII3 467 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 C4orf50Q6ZRC1 276 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 APBB1IPQ7Z5R6 666 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 PHF13Q86YI8 300 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 MYLK4Q86YV6 388 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 C4orf19Q8IY42 314 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 ALLCQ8N6M5 410 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 CHURC1Q8WUH1 139 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 CPA5Q8WXQ8 436 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 ZNF75CPQ92670 426 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 FAM136AQ96C01 138 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 NTPCRQ9BSD7 190 aaKnown RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 AGO4Q9HCK5 861 aaKnown RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 TOPORSQ9NS56 1045 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 PSMC3IPQ9P2W1 217 aaPredicted RBP8.96□□□□□ -0.98
VPS50-208ENST00000458707 ZFP69BQ9UJL9 534 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 SHOC2Q9UQ13 582 aa8.96□□□□□ -0.98
VPS50-208ENST00000458707 MGAMO43451 1857 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 ASTN2O75129 1339 aaPredicted RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 POC1B-GALNT4F8VUJ3 575 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 DDX39AO00148 427 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 PDLIM1O00151 329 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 RGS20O76081 388 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 CBX6O95503 412 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 KRT15P19012 456 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 CTCFP49711 727 aaPredicted RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 GHRHRQ02643 423 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 DEUP1Q05D60 604 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 MCL1Q07820 350 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 KLC1Q07866 573 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 NFX1Q12986 1120 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 SPP2Q13103 211 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 MAMLD1Q13495 774 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 FASTKD3Q14CZ7 662 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 DACT2Q5SW24 774 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 RNASEH2BQ5TBB1 312 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 LIN9Q5TKA1 542 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 DAB2IPQ5VWQ8 1189 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 FYB2Q5VWT5 728 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 PPP1R2P3Q6NXS1 205 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 LLGL2Q6P1M3 1020 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 ZNF449Q6P9G9 518 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 LVRNQ6Q4G3 990 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 GSTA5Q7RTV2 222 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 KRT27Q7Z3Y8 459 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 CLNKQ7Z7G1 428 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 SEPT12Q8IYM1 358 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 RCOR2Q8IZ40 523 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 C4orf33Q8N1A6 199 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 GLIS1Q8NBF1 620 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 SUPT20HQ8NEM7 779 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 TTC8Q8TAM2 541 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 DNAJC9Q8WXX5 260 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 ZNF333Q96JL9 665 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 MIPEPQ99797 713 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 FAM118BQ9BPY3 351 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 DHRS4Q9BTZ2 278 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 TUBB6Q9BUF5 446 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 MAK16Q9BXY0 300 aaKnown RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 FHDC1Q9C0D6 1143 aaPredicted RBP8.95□□□□□ -0.98
VPS50-208ENST00000458707 C1orf112Q9NSG2 853 aa8.95□□□□□ -0.98
VPS50-208ENST00000458707 ANKEF1Q9NU02 776 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms