RNA–Protein interactions for RNA: ENST00000458610.6

CD28-203, Transcript of CD28 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD28, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-203ENST00000458610 ITIH5Q86UX2 942 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 ATAD1Q8NBU5 361 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 NELFBQ8WX92 580 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 NXPE3Q969Y0 559 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 RTP3Q9BQQ7 232 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 C1QTNF1Q9BXJ1 281 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 DNAI2Q9GZS0 605 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 NUP62CLQ9H1M0 184 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 IGSF9Q9P2J2 1179 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 DNMT3BQ9UBC3 853 aaKnown RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 NXF1Q9UBU9 619 aaKnown RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 ARMCX3Q9UH62 379 aaPredicted RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 MRPS23Q9Y3D9 190 aaKnown RBP17.3■□□□□ 0.36
CD28-203ENST00000458610 YIPF1Q9Y548 306 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 PLXNA3P51805 1871 aa17.3■□□□□ 0.36
CD28-203ENST00000458610 EYSQ5T1H1 3165 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 MICAL2O94851 1124 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 GNA14O95837 355 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 PIK3CAP42336 1068 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 GCLMP48507 274 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 PAK1Q13153 545 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 TAF12Q16514 161 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 MGAT5BQ3V5L5 792 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 KRT39Q6A163 491 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 C4orf50Q6ZRC1 276 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 ZC3H3Q8IXZ2 948 aaKnown RBP17.29■□□□□ 0.36
CD28-203ENST00000458610 MLKLQ8NB16 471 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 OR6B3Q8NGW1 331 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 TMEM209Q96SK2 561 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 XYLT2Q9H1B5 865 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 TMEM8AQ9HCN3 771 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 ABCB6Q9NP58 842 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 EPS15L1Q9UBC2 864 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 LIMD1Q9UGP4 676 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 SLC27A5Q9Y2P5 690 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 SCN1AP35498 2009 aa17.29■□□□□ 0.36
CD28-203ENST00000458610 FGF19O95750 216 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 RHOP08100 348 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 HAPLN1P10915 354 aaPredicted RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 LAMP2P13473 410 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 CD44P16070 742 aaKnown RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 PMS1P54277 932 aaKnown RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 RPL10AP62906 217 aaKnown RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 SCARA3Q6AZY7 606 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 PDZD4Q76G19 769 aaPredicted RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 GET4Q7L5D6 327 aaPredicted RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 FRMD5Q7Z6J6 570 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 LRRTM3Q86VH5 581 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 SPATA2LQ8IUW3 424 aaPredicted RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 FAM200AQ8TCP9 573 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 FUBP3Q96I24 572 aaKnown RBP eCLIP17.28■□□□□ 0.36
CD28-203ENST00000458610 FAXDC2Q96IV6 333 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 SEPT5Q99719 369 aaPredicted RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 SYT15Q9BQS2 421 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 CORO1BQ9BR76 489 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 ASAH2Q9NR71 780 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 ABI2Q9NYB9 513 aaPredicted RBP17.28■□□□□ 0.36
CD28-203ENST00000458610 CDH7Q9ULB5 785 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 TTC28Q96AY4 2481 aa17.28■□□□□ 0.36
CD28-203ENST00000458610 NCOR1O75376 2440 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 VNN1O95497 513 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 HLA-DRAP01903 254 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 TRIM49P0CI25 452 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 TRIM49CP0CI26 452 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 BMP6P22004 513 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 ACAT1P24752 427 aaKnown RBP17.27■□□□□ 0.36
CD28-203ENST00000458610 PPP3CAQ08209 521 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 PTPN21Q16825 1174 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 CCDC40Q4G0X9 1142 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 C1orf220Q5T0J3 134 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 TCERG1LQ5VWI1 586 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 OSTM1Q86WC4 334 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 KBTBD7Q8WVZ9 684 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 EEF2KMTQ96G04 330 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 MMRN2Q9H8L6 949 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 HCFC1R1Q9NWW0 138 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 GDE1Q9NZC3 331 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 CEP72Q9P209 647 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 MAGEC2Q9UBF1 373 aaPredicted RBP17.27■□□□□ 0.36
CD28-203ENST00000458610 DACH1Q9UI36 760 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 MUTYHQ9UIF7 546 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 GTF3C4Q9UKN8 822 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 CTNND2Q9UQB3 1225 aa17.27■□□□□ 0.36
CD28-203ENST00000458610 A8MXQ7 604 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 VNN2O95498 520 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 ASS1P00966 412 aaKnown RBP17.26■□□□□ 0.35
CD28-203ENST00000458610 PDGFRBP09619 1106 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 NTHL1P78549 312 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 CETN1Q12798 172 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 MTMR3Q13615 1198 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 DCAF17Q5H9S7 520 aaPredicted RBP17.26■□□□□ 0.35
CD28-203ENST00000458610 WDR44Q5JSH3 913 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 TTI2Q6NXR4 508 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 FAM171BQ6P995 826 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 UBALD2Q8IYN6 164 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 TTC39CQ8N584 583 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 FBXL13Q8NEE6 735 aa17.26■□□□□ 0.35
CD28-203ENST00000458610 FEZF2Q8TBJ5 459 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms