RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 RTKNQ9BST9 563 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 CCDC39Q9UFE4 941 aa23.25■■□□□ 1.31
CPNE1-220ENST00000458038 SOAT2O75908 522 aa23.24■■□□□ 1.31
CPNE1-220ENST00000458038 DDX6P26196 483 aaKnown RBP eCLIP23.24■■□□□ 1.319e-13■■■■□ 25.3
CPNE1-220ENST00000458038 GAS6Q14393 721 aa23.24■■□□□ 1.31
CPNE1-220ENST00000458038 ZC2HC1CQ53FD0 456 aaPredicted RBP23.24■■□□□ 1.31
CPNE1-220ENST00000458038 LONP2Q86WA8 852 aa23.24■■□□□ 1.31
CPNE1-220ENST00000458038 POMGNT1Q8WZA1 660 aa23.24■■□□□ 1.31
CPNE1-220ENST00000458038 ZNF560Q96MR9 790 aa23.24■■□□□ 1.31
CPNE1-220ENST00000458038 LRRC3BQ96PB8 259 aa23.24■■□□□ 1.31
CPNE1-220ENST00000458038 EXOC7Q9UPT5 735 aa23.24■■□□□ 1.31
CPNE1-220ENST00000458038 KPNA7A9QM74 516 aa23.23■■□□□ 1.31
CPNE1-220ENST00000458038 FOXD2O60548 495 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-220ENST00000458038 CD2BP2O95400 341 aaKnown RBP23.23■■□□□ 1.31
CPNE1-220ENST00000458038 HAPLN1P10915 354 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-220ENST00000458038 GAP43P17677 238 aa23.23■■□□□ 1.31
CPNE1-220ENST00000458038 ATXN1P54253 815 aaKnown RBP23.23■■□□□ 1.31
CPNE1-220ENST00000458038 GRIN1Q05586 938 aa23.23■■□□□ 1.31
CPNE1-220ENST00000458038 SIM2Q14190 667 aaPredicted RBP23.23■■□□□ 1.31
CPNE1-220ENST00000458038 ITPRIPL2Q3MIP1 535 aa23.23■■□□□ 1.31
CPNE1-220ENST00000458038 LPIN3Q9BQK8 851 aa23.23■■□□□ 1.31
CPNE1-220ENST00000458038 IL21Q9HBE4 155 aa23.23■■□□□ 1.31
CPNE1-220ENST00000458038 GTSE1Q9NYZ3 720 aa23.23■■□□□ 1.31
CPNE1-220ENST00000458038 ATF6P18850 670 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 PDCP20941 246 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 SOX9P48436 509 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 NFE2Q16621 373 aaPredicted RBP23.22■■□□□ 1.31
CPNE1-220ENST00000458038 WSCD1Q658N2 575 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 PRR23BQ6ZRT6 265 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 CMTM8Q8IZV2 173 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 CACTINQ8WUQ7 758 aaKnown RBP23.22■■□□□ 1.31
CPNE1-220ENST00000458038 PCDHB5Q9Y5E4 795 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 SPAG17Q6Q759 2223 aa23.22■■□□□ 1.31
CPNE1-220ENST00000458038 ACACBO00763 2458 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 K7ESF4 209 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 PPP1R37O75864 691 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 PRAMEF12O95522 483 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 LDHAP00338 332 aaKnown RBP23.21■■□□□ 1.31
CPNE1-220ENST00000458038 TSPY1Q01534 308 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 CCINQ13939 588 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 TXNDC11Q6PKC3 985 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 CRELD2Q6UXH1 353 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-220ENST00000458038 LRRTM3Q86VH5 581 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 SFR1Q86XK3 245 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 GPIHBP1Q8IV16 184 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 ZFYVE19Q96K21 471 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 ACCSQ96QU6 501 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 STRA6Q9BX79 667 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 SLC46A2Q9BY10 475 aa23.21■■□□□ 1.31
CPNE1-220ENST00000458038 MRPL44Q9H9J2 332 aaKnown RBP23.21■■□□□ 1.31
CPNE1-220ENST00000458038 RBM12Q9NTZ6 932 aaKnown RBP23.21■■□□□ 1.31
CPNE1-220ENST00000458038 KIF26AQ9ULI4 1882 aaPredicted RBP23.21■■□□□ 1.31
CPNE1-220ENST00000458038 CHURC1-FNTBB4DL54 471 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 TISP43B9A030 160 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 ADSSP30520 456 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 AVPR1AP37288 418 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 TXLNAP40222 546 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 FNTBP49356 437 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 CYP4F8P98187 520 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 AMPD2Q01433 879 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 SPEM2Q0P670 501 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 PON2Q15165 354 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 SV2BQ7L1I2 683 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 DYMQ7RTS9 669 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 SPATA18Q8TC71 538 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 EPSTI1Q96J88 318 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 KIF9Q9HAQ2 790 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 PARD6AQ9NPB6 346 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 ABI2Q9NYB9 513 aaPredicted RBP23.2■■□□□ 1.3
CPNE1-220ENST00000458038 PCDHB13Q9Y5F0 798 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 EPG5Q9HCE0 2579 aa23.2■■□□□ 1.3
CPNE1-220ENST00000458038 HRO43593 1189 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 CSH1P0DML2 217 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 CSH2P0DML3 217 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 ALCAMQ13740 583 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 RRAGBQ5VZM2 374 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 EFCAB13Q8IY85 973 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 TMEM86AQ8N2M4 240 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 NETO1Q8TDF5 533 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 GIPC2Q8TF65 315 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 LEO1Q8WVC0 666 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-220ENST00000458038 EXOC4Q96A65 974 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 ACBD6Q9BR61 282 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 ABCB6Q9NP58 842 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 GKN1Q9NS71 199 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 UXTQ9UBK9 157 aaPredicted RBP23.19■■□□□ 1.3
CPNE1-220ENST00000458038 SRPRBQ9Y5M8 271 aaKnown RBP23.19■■□□□ 1.3
CPNE1-220ENST00000458038 CACNA1BQ00975 2339 aa23.19■■□□□ 1.3
CPNE1-220ENST00000458038 SDK1Q7Z5N4 2213 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 ATG13O75143 517 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 F11P03951 625 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 GARTP22102 1010 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 NLRP12P59046 1061 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 TNK2Q07912 1038 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 BFSP1Q12934 665 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 CSRP2Q16527 193 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 LPAL2Q16609 132 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 WDR44Q5JSH3 913 aa23.18■■□□□ 1.3
CPNE1-220ENST00000458038 L1TD1Q5T7N2 865 aaKnown RBP23.18■■□□□ 1.3
CPNE1-220ENST00000458038 Q6ZS52 159 aa23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms