RNA–Protein interactions for RNA: ENST00000457889.1

CDC42EP3-204, Transcript of CDC42 effector protein 3, humanhuman

TSL 2

Gene CDC42EP3, Length 997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-204ENST00000457889 LHX1P48742 406 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SCNN1GP51170 649 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 RAD23BP54727 409 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 GALCP54803 685 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 NOMO3P69849 1222 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 GPC5P78333 572 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SOX4Q06945 474 aaPredicted RBP9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 DSC1Q08554 894 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 CNGA2Q16280 664 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 UPP1Q16831 310 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SGO2Q562F6 1265 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 NOMO2Q5JPE7 1267 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 ZNF569Q5MCW4 686 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 TAF3Q5VWG9 929 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 CNKSR3Q6P9H4 555 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SYT10Q6XYQ8 523 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 PHF13Q86YI8 300 aaPredicted RBP9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 NPAS4Q8IUM7 802 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 ABI1Q8IZP0 508 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SLC4A11Q8NBS3 891 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 RNF169Q8NCN4 708 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 DBF4BQ8NFT6 615 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 LINC01599Q8WXQ3 324 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 LPPQ93052 612 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 PAWRQ96IZ0 340 aaKnown RBP9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 NAPGQ99747 312 aaPredicted RBP9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 ZBED2Q9BTP6 218 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 ADAM33Q9BZ11 813 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 WNT8AQ9H1J5 351 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SNX25Q9H3E2 840 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 PUF60Q9UHX1 559 aaKnown RBP9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 STRIP2Q9ULQ0 834 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 ATP11BQ9Y2G3 1177 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 PCDHB7Q9Y5E2 793 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SCINQ9Y6U3 715 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 SCN1AP35498 2009 aa9.48□□□□□ -0.89
CDC42EP3-204ENST00000457889 ABHD14A-ACY1A0A1B0GW23 586 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 MEIS3P2A8K0S8 358 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 ENPP3O14638 875 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 TRAPPC3O43617 180 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 TIMP1P01033 207 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 CYP11A1P05108 521 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 CYP1A2P05177 515 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 ODC1P11926 461 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 CD19P15391 556 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 MMP8P22894 467 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 PCSK1P29120 753 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 NDST1P52848 882 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 TERF1P54274 439 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 NAP1L1P55209 391 aaKnown RBP9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 GSCP56915 257 aaPredicted RBP9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 TAP1Q03518 808 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 IKBKEQ14164 716 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 GPNMBQ14956 572 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 SOWAHAQ2M3V2 549 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 ARHGAP17Q68EM7 881 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 C11orf63Q6NUN7 778 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 DCLRE1AQ6PJP8 1040 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 LCLAT1Q6UWP7 414 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 THSD4Q6ZMP0 1018 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 RTN4RL1Q86UN2 441 aaPredicted RBP9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 GPIHBP1Q8IV16 184 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 ADGRF2Q8IZF7 708 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 CRYBG2Q8N1P7 616 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 WHAMMQ8TF30 809 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 DIS3LQ8TF46 1054 aaKnown RBP9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 WDR24Q96S15 920 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 PCDHB18PQ96TA0 734 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 OSBPL7Q9BZF2 842 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 ELOVL4Q9GZR5 314 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 SDCBP2Q9H190 292 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 CXCL16Q9H2A7 254 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 L2HGDHQ9H9P8 463 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 MRPL47Q9HD33 250 aaKnown RBP9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 CYLDQ9NQC7 956 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 WDR35Q9P2L0 1181 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 LRFN2Q9ULH4 789 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 TTC3P53804 2025 aa9.47□□□□□ -0.89
CDC42EP3-204ENST00000457889 A8MXQ7 604 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 M0QZQ0 153 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 O00370 1275 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 CYB561D2O14569 222 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 GABRDO14764 452 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 PPEF2O14830 753 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 BAIAP3O94812 1187 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 PRLRP16471 622 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 TYMPP19971 482 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 GNL1P36915 607 aaPredicted RBP9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 RAP1GAPP47736 663 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 CLCNKBP51801 687 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 TUBB4BP68371 445 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 RNASELQ05823 741 aaKnown RBP9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 LRRC26Q2I0M4 334 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 CLLU1OSQ5K130 101 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 NAA35Q5VZE5 725 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 PAPD7Q5XG87 772 aaKnown RBP9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 MON1BQ7L1V2 547 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 UBE2Q1Q7Z7E8 422 aa9.46□□□□□ -0.9
CDC42EP3-204ENST00000457889 METTL23Q86XA0 190 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms