RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 LRRTM3Q86VH5 581 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 OSTM1Q86WC4 334 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 METTL23Q86XA0 190 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 TMEM86AQ8N2M4 240 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 FBXL13Q8NEE6 735 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 OR10T2Q8NGX3 314 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 SPATA18Q8TC71 538 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 HDAC7Q8WUI4 952 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 KBTBD7Q8WVZ9 684 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 TAF4BQ92750 862 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 CASP10Q92851 521 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 TMEM209Q96SK2 561 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 PI4K2AQ9BTU6 479 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 DNAJC25Q9H1X3 360 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 S1PR5Q9H228 398 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 THAP9Q9H5L6 903 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 MMRN2Q9H8L6 949 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 SAMSN1Q9NSI8 373 aaKnown RBP10.78□□□□□ -0.68
ATG4A-206ENST00000457035 BARX2Q9UMQ3 279 aaPredicted RBP10.78□□□□□ -0.68
ATG4A-206ENST00000457035 DOCK8Q8NF50 2099 aa10.78□□□□□ -0.68
ATG4A-206ENST00000457035 SYCE3A1L190 88 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 H3BQ06 376 aaPredicted RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 PAPLNO95428 1278 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 VNN2O95498 520 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 ATF2P15336 505 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 HOXB8P17481 243 aaPredicted RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 KCNA5P22460 613 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 WARSP23381 471 aaKnown RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 LMO2P25791 158 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 LHX1P48742 406 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 GPR17Q13304 367 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 NCAPHQ15003 741 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 TPD52L1Q16890 204 aaPredicted RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 ZNF699Q32M78 642 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 LEXMQ3ZCV2 418 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 ZNF667Q5HYK9 610 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 TPGS2Q68CL5 300 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 SPOPLQ6IQ16 392 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 EP400NLQ6ZTU2 488 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 THEM5Q8N1Q8 247 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 KREMEN2Q8NCW0 462 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 LMO3Q8TAP4 145 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 FEZF2Q8TBJ5 459 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 CNOT6LQ96LI5 555 aaKnown RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 MMS19Q96T76 1030 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 ACBD6Q9BR61 282 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 MRPL45Q9BRJ2 306 aaKnown RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 C1QTNF1Q9BXJ1 281 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 ZCWPW1Q9H0M4 648 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 PLEKHA4Q9H4M7 779 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 EPHX3Q9H6B9 360 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 APOBEC3GQ9HC16 384 aaKnown RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 MAN1C1Q9NR34 630 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 RAB20Q9NX57 234 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 NXF1Q9UBU9 619 aaKnown RBP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 FBXW11Q9UKB1 542 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 POLIQ9UNA4 740 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 NFE2L3Q9Y4A8 694 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 NME7Q9Y5B8 376 aa10.77□□□□□ -0.69
ATG4A-206ENST00000457035 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.77□□□□□ -0.69
ATG4A-206ENST00000457035 ZNF638Q14966 1978 aaKnown RBP10.76□□□□□ -0.69
ATG4A-206ENST00000457035 P4HA2O15460 535 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 HCRTO43612 131 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 SEC24AO95486 1093 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 OR4Q2P0C623 313 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 GNL1P36915 607 aaPredicted RBP10.76□□□□□ -0.69
ATG4A-206ENST00000457035 PIK3CAP42336 1068 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 CDH8P55286 799 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 ARPP19P56211 112 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 TNNC1P63316 161 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 NOP14P78316 857 aaKnown RBP10.76□□□□□ -0.69
ATG4A-206ENST00000457035 UVSSAQ2YD98 709 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 ANO6Q4KMQ2 910 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 CDKAL1Q5VV42 579 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 RNF19BQ6ZMZ0 732 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 CREBRFQ8IUR6 639 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 ADGRF2Q8IZF7 708 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 C12orf76Q8N812 135 aaPredicted RBP10.76□□□□□ -0.69
ATG4A-206ENST00000457035 SMRP1Q8NCR6 262 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 TATDN2Q93075 761 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 FAXDC2Q96IV6 333 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 PKMYT1Q99640 499 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 BPIFA3Q9BQP9 254 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 BCO2Q9BYV7 579 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 SDCBP2Q9H190 292 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 HSD3B7Q9H2F3 369 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10.76□□□□□ -0.696e-6■■■■■ 48.1
ATG4A-206ENST00000457035 DZANK1Q9NVP4 752 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 FANCLQ9NW38 375 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 DDX43Q9NXZ2 648 aaKnown RBP10.76□□□□□ -0.69
ATG4A-206ENST00000457035 AFF4Q9UHB7 1163 aaKnown RBP10.76□□□□□ -0.69
ATG4A-206ENST00000457035 DPP7Q9UHL4 492 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 CD207Q9UJ71 328 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 MAFFQ9ULX9 164 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 GREB1Q4ZG55 1949 aa10.76□□□□□ -0.69
ATG4A-206ENST00000457035 BDP1A6H8Y1 2624 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 LRRC10BA6NIK2 292 aa10.75□□□□□ -0.69
ATG4A-206ENST00000457035 N4BP1O75113 896 aaKnown RBP10.75□□□□□ -0.69
ATG4A-206ENST00000457035 ATP2C2O75185 946 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms