RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 SLC26A2P50443 739 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 COPS2P61201 443 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 TFDP1Q14186 410 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 PIGHQ14442 188 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 CCDC38Q502W7 563 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 ERICH1Q86X53 443 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 SULF1Q8IWU6 871 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 DHX37Q8IY37 1157 aaKnown RBP19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 ACTR5Q9H9F9 607 aaPredicted RBP19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 KCNH4Q9UQ05 1017 aa19.42■□□□□ 0.7
SEMA3B-209ENST00000456560 GOLGA6L7A0A1B0GV03 622 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 GJB1P08034 283 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 MOGSQ13724 837 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 TXNRD3NBQ6F5E7 133 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 DENND1BQ6P3S1 775 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 DCUN1D2Q6PH85 259 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 PRUNE1Q86TP1 453 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 COPS5Q92905 334 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 L3MBTL3Q96JM7 780 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 FOXP3Q9BZS1 431 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 SMARCAD1Q9H4L7 1026 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 CD248Q9HCU0 757 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 SLC40A1Q9NP59 571 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 DNPEPQ9ULA0 475 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 DRG1Q9Y295 367 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 SPDYE5A6NIY4 337 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 TJP3O95049 919 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 MBTD1Q05BQ5 628 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 SCARA5Q6ZMJ2 495 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 PIGWQ7Z7B1 504 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 FBXO16Q8IX29 292 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 CEP120Q8N960 986 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 ARHGEF2Q92974 986 aaKnown RBP19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 ANKRD36BP1Q96IX9 119 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 ZNF668Q96K58 619 aaPredicted RBP19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 POLIQ9UNA4 740 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 TNFSF13BQ9Y275 285 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 MGAMO43451 1857 aa19.41■□□□□ 0.7
SEMA3B-209ENST00000456560 hCG_1818297A0A087WSY0 165 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 INO80B-WBP1J3KQ70 363 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 ASAP2O43150 1006 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 HBP1O60381 514 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 RASSF9O75901 435 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 YWHAEP62258 255 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 TMEM63BQ5T3F8 832 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 KAZNQ674X7 775 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 EFCAB12Q6NXP0 572 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 NLRP4Q96MN2 994 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 MMP19Q99542 508 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 PRMT1Q99873 361 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 INO80BQ9C086 356 aaPredicted RBP19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 CDT1Q9H211 546 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 LHX5Q9H2C1 402 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 MINDY3Q9H8M7 445 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 DDX56Q9NY93 547 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 CHUKO15111 745 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 RDXP35241 583 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 OSTNP61366 133 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 KCTD2Q14681 263 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 P3H1Q32P28 736 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 CYP4A22Q5TCH4 519 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 GSTA5Q7RTV2 222 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 LRRC34Q8IZ02 419 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 ZCCHC9Q8N567 271 aaKnown RBP19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 ALLCQ8N6M5 410 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 GLIS1Q8NBF1 620 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 CCHCR1Q8TD31 782 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 BCO2Q9BYV7 579 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 OSBPL7Q9BZF2 842 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 LGALS13Q9UHV8 139 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 SIX4Q9UIU6 781 aa19.4■□□□□ 0.7
SEMA3B-209ENST00000456560 IL18RAPO95256 599 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 ATF7P17544 494 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 CDKN2BP42772 138 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 VSTM1Q6UX27 236 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 CDR2LQ86X02 465 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 TMEM192Q8IY95 271 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 ZBTB10Q96DT7 871 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 CYTH4Q9UIA0 394 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 STRIP2Q9ULQ0 834 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 DNALI1O14645 258 aaPredicted RBP19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 IQCF3P0C7M6 154 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 TXNP10599 105 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 CREB1P16220 341 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 ATP5DP30049 168 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 CLCN3P51790 818 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 PTPN20Q4JDL3 420 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 MOB2Q70IA6 237 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 ANKRD13AQ8IZ07 590 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 NFKBIZQ9BYH8 718 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 CTNNAL1Q9UBT7 734 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 NXF1Q9UBU9 619 aaKnown RBP19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 CEP83Q9Y592 693 aa19.39■□□□□ 0.69
SEMA3B-209ENST00000456560 C3orf70A6NLC5 250 aaPredicted RBP19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 SIGLEC16A6NMB1 481 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 GPR25O00155 361 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 CXCL8P10145 99 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 PPIL2Q13356 520 aa19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 OASLQ15646 514 aaKnown RBP19.38■□□□□ 0.69
SEMA3B-209ENST00000456560 CCDC142Q17RM4 750 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms