RNA–Protein interactions for RNA: ENST00000456367.5

PCDH9-203, Transcript of protocadherin 9, humanhuman

TSL 1 (best) BASIC

Gene PCDH9, Length 5,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-203ENST00000456367 RPAP3Q9H6T3 665 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 GREM2Q9H772 168 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 TUFT1Q9NNX1 390 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 VPS45Q9NRW7 570 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 INTS13Q9NVM9 706 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 THAP1Q9NVV9 213 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 PLK2Q9NYY3 685 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 KIF17Q9P2E2 1029 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 XPO7Q9UIA9 1087 aaKnown RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 GGA1Q9UJY5 639 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 IQGAP1P46940 1657 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 MYMKA6NI61 221 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 GSG1L2A8MUP6 293 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 AGPSO00116 658 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 VWA5AO00534 786 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 NFIBO00712 420 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 PMLP29590 882 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CIITAP33076 1130 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 GUCY1A2P33402 732 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 AQP5P55064 265 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CHRNDQ07001 517 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 THOC7Q6I9Y2 204 aaKnown RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CATSPER3Q86XQ3 398 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CCNYL1Q8N7R7 359 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 FAM13CQ8NE31 585 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 RBM17Q96I25 401 aaKnown RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 FAM111AQ96PZ2 611 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 C11orf70Q9BRQ4 267 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 C9orf16Q9BUW7 83 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 PCIF1Q9H4Z3 704 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 SLC38A10Q9HBR0 1119 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 PNPLA3Q9NST1 481 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 NRBP2Q9NSY0 501 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CLIC5Q9NZA1 410 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 SPHKAPQ2M3C7 1700 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CLTCL1P53675 1640 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 FRMPD2Q68DX3 1309 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 NCKAP5LQ9HCH0 1330 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 C1orf232A0A0U1RR37 186 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 ERVV-1B6SEH8 477 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 DDX39AO00148 427 aaKnown RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 DNALI1O14645 258 aaPredicted RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 RAG1P15918 1043 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 ME2P23368 584 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 RFC4P35249 363 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 ALDH1A3P47895 512 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 KLK7P49862 253 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 PTK6Q13882 451 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 SLC15A2Q16348 729 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 HEATR6Q6AI08 1181 aaKnown RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 NEK10Q6ZWH5 1172 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CCNYQ8ND76 341 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 MCUQ8NE86 351 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 ADCY4Q8NFM4 1077 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 ZNF507Q8TCN5 953 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 OSCP1Q8WVF1 389 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 POP5Q969H6 163 aaKnown RBP5.22□□□□□ -1.57
PCDH9-203ENST00000456367 NCLNQ969V3 563 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 ATP6V1E2Q96A05 226 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 C18orf8Q96DM3 657 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CCDC126Q96EE4 140 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 APOPT1Q96IL0 206 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 CDHR1Q96JP9 859 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 OSBPL11Q9BXB4 747 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 PKD2L1Q9P0L9 805 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 RAB26Q9ULW5 256 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 TFR2Q9UP52 801 aa5.22□□□□□ -1.57
PCDH9-203ENST00000456367 GRIN2DO15399 1336 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 CCDC162PA2VCL2 907 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 POTEMA6NI47 508 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 TRIM49D1C9J1S8 452 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 TRMUO75648 421 aaKnown RBP5.21□□□□□ -1.57
PCDH9-203ENST00000456367 PDE9AO76083 593 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 CBX6O95503 412 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 GCLMP48507 274 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 VCPP55072 806 aaKnown RBP5.21□□□□□ -1.57
PCDH9-203ENST00000456367 KCNA1Q09470 495 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 OVGP1Q12889 678 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 TFDP1Q14186 410 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 CTTNQ14247 550 aaKnown RBP5.21□□□□□ -1.57
PCDH9-203ENST00000456367 RRP1BQ14684 758 aaKnown RBP5.21□□□□□ -1.57
PCDH9-203ENST00000456367 PPP1R15BQ5SWA1 713 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 NT5DC3Q86UY8 548 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 NCAPG2Q86XI2 1143 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 FOXP4Q8IVH2 680 aaPredicted RBP5.21□□□□□ -1.57
PCDH9-203ENST00000456367 ARHGEF19Q8IW93 802 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 CCDC117Q8IWD4 279 aaPredicted RBP5.21□□□□□ -1.57
PCDH9-203ENST00000456367 MCPH1Q8NEM0 835 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 ATP8B4Q8TF62 1192 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 SEPT8Q92599 483 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 TSPAN17Q96FV3 270 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 DEPDC7Q96QD5 511 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 ADPGKQ9BRR6 497 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 GRIP2Q9C0E4 1043 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 RSAD1Q9HA92 442 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 VTI1BQ9UEU0 232 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 PRPF19Q9UMS4 504 aaKnown RBP5.21□□□□□ -1.57
PCDH9-203ENST00000456367 PCDHB2Q9Y5E7 798 aa5.21□□□□□ -1.57
PCDH9-203ENST00000456367 EMSYQ7Z589 1322 aa5.21□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms