RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 TADA2BQ86TJ2 420 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 LINC01465Q8N7H1 131 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 MDM1Q8TC05 714 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 FNIP1Q8TF40 1166 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 DDX23Q9BUQ8 820 aaKnown RBP15.93■□□□□ 0.14
LDLR-202ENST00000455727 CCDC134Q9H6E4 229 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 VRTNQ9H8Y1 702 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 SIX4Q9UIU6 781 aa15.93■□□□□ 0.14
LDLR-202ENST00000455727 SIGLEC16A6NMB1 481 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 GPR25O00155 361 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 KIAA0754O94854 1291 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 KRT1P04264 644 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 CXCL8P10145 99 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 INSRRP14616 1297 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 ATICP31939 592 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 GJC1P36383 396 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 TFDP3Q5H9I0 405 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 HIBCHQ6NVY1 386 aaPredicted RBP15.92■□□□□ 0.14
LDLR-202ENST00000455727 MFSD7Q6UXD7 560 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 SCARA5Q6ZMJ2 495 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 ARMCX2Q7L311 632 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 UHMK1Q8TAS1 419 aaKnown RBP15.92■□□□□ 0.14
LDLR-202ENST00000455727 ASB7Q9H672 318 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 EFR3BQ9Y2G0 817 aa15.92■□□□□ 0.14
LDLR-202ENST00000455727 SMIM23A6NLE4 172 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 ACSL3O95573 720 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 CPP00450 1065 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 TCF4P15884 667 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 ATP5DP30049 168 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 SNAPC2Q13487 334 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 AMHR2Q16671 573 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 IZUMO3Q5VZ72 239 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 DENND1BQ6P3S1 775 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 TMEM192Q8IY95 271 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 C1orf127Q8N9H9 656 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 IPO4Q8TEX9 1081 aaKnown RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 ATXN2LQ8WWM7 1075 aaKnown RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 EMID1Q96A84 441 aaPredicted RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 CHMP6Q96FZ7 201 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 WDR35Q9P2L0 1181 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 NXF1Q9UBU9 619 aaKnown RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 PNMA3Q9UL41 463 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 POLIQ9UNA4 740 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 COL1A2P08123 1366 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 hCG_1818297A0A087WSY0 165 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 RBM47A0AV96 593 aaKnown RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 LACTBL1A8MY62 500 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 PI4K2BG5E9Z4 385 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 LGALS2P05162 132 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 STAG3L1P0CL83 205 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 KRT10P13645 584 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 RAD23BP54727 409 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 ZNF792Q3KQV3 632 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 WDR72Q3MJ13 1102 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 EAPPQ56P03 285 aaPredicted RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 LDLRAD1Q5T700 205 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 TAPT1Q6NXT6 567 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 GSTA5Q7RTV2 222 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 OTUD6BQ8N6M0 293 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 CXorf38Q8TB03 319 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 FBXO41Q8TF61 875 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 L3MBTL3Q96JM7 780 aaPredicted RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 ZNF668Q96K58 619 aaPredicted RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 FAM124BQ9H5Z6 455 aaPredicted RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 CYP3A43Q9HB55 503 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 VTA1Q9NP79 307 aa15.91■□□□□ 0.14
LDLR-202ENST00000455727 DDX20Q9UHI6 824 aaKnown RBP15.91■□□□□ 0.14
LDLR-202ENST00000455727 NDC80O14777 642 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 GH1P01241 217 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 KRT19P08727 400 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 CDKN2BP42772 138 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 SLCO1A2P46721 670 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 KYNUQ16719 465 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 PTPN20Q4JDL3 420 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 EXOC3L1Q86VI1 746 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 CDR2LQ86X02 465 aaPredicted RBP15.9■□□□□ 0.14
LDLR-202ENST00000455727 ZCCHC9Q8N567 271 aaKnown RBP15.9■□□□□ 0.14
LDLR-202ENST00000455727 ALLCQ8N6M5 410 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 NKD2Q969F2 451 aaPredicted RBP15.9■□□□□ 0.14
LDLR-202ENST00000455727 ZNF317Q96PQ6 595 aaPredicted RBP15.9■□□□□ 0.14
LDLR-202ENST00000455727 SELENOSQ9BQE4 189 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 NINJ2Q9NZG7 142 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 DNPEPQ9ULA0 475 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 NFICP08651 508 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 KRT3P12035 628 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 CD19P15391 556 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 ATF7P17544 494 aaPredicted RBP15.9■□□□□ 0.14
LDLR-202ENST00000455727 DRD4P21917 467 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 RFC1P35251 1148 aaPredicted RBP15.9■□□□□ 0.14
LDLR-202ENST00000455727 CCNA1P78396 465 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 ZFYVE27Q5T4F4 411 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 CYP4A22Q5TCH4 519 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 PPTC7Q8NI37 304 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 ZBTB10Q96DT7 871 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 EFCC1Q9HA90 598 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 INTS9Q9NV88 658 aaKnown RBP15.9■□□□□ 0.14
LDLR-202ENST00000455727 KLHL11Q9NVR0 708 aa15.9■□□□□ 0.14
LDLR-202ENST00000455727 A0A087WZ62 844 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 ITGAVP06756 1048 aa15.89■□□□□ 0.13
LDLR-202ENST00000455727 KRT7P08729 469 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms