RNA–Protein interactions for RNA: ENST00000455383.5

MSH6-206, Transcript of mutS homolog 6, humanhuman

TSL 5

Gene MSH6, Length 578 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-206ENST00000455383 TMEM150AQ86TG1 271 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 LRRTM3Q86VH5 581 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 GPBP1Q86WP2 473 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 MYCT1Q8N699 235 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 GAB3Q8WWW8 586 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 AK8Q96MA6 479 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 SMG9Q9H0W8 520 aaKnown RBP20.21■□□□□ 0.83
MSH6-206ENST00000455383 PARVGQ9HBI0 331 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 HPS4Q9NQG7 708 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 GKN1Q9NS71 199 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 THG1LQ9NWX6 298 aaKnown RBP20.21■□□□□ 0.83
MSH6-206ENST00000455383 C2CD2Q9Y426 696 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 ANK1P16157 1881 aa20.21■□□□□ 0.83
MSH6-206ENST00000455383 SCN1AP35498 2009 aa20.2■□□□□ 0.83
MSH6-206ENST00000455383 GREB1Q4ZG55 1949 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 TRAK2O60296 914 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 EPN2O95208 641 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 ZNF806P0C7X5 589 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 POU5F1Q01860 360 aaKnown RBP20.2■□□□□ 0.82
MSH6-206ENST00000455383 ST3GAL2Q16842 350 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 FSTL4Q6MZW2 842 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 CMTM8Q8IZV2 173 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 SPPL2BQ8TCT7 592 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 FAM212AQ96EL1 285 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 STYXL1Q9Y6J8 313 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 ZFHX4Q86UP3 3567 aa20.2■□□□□ 0.82
MSH6-206ENST00000455383 MAP1BP46821 2468 aaKnown RBP20.19■□□□□ 0.82
MSH6-206ENST00000455383 OTOL1A6NHN0 477 aaPredicted RBP20.19■□□□□ 0.82
MSH6-206ENST00000455383 SOBPA7XYQ1 873 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 ANKRD63C9JTQ0 380 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 TRDMT1O14717 391 aaKnown RBP20.19■□□□□ 0.82
MSH6-206ENST00000455383 FAM13AO94988 1023 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 F11P03951 625 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 HMGA1P17096 107 aaKnown RBP20.19■□□□□ 0.82
MSH6-206ENST00000455383 ABCD1P33897 745 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 RUNX3Q13761 415 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 MCTP1Q6DN14 999 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 CACNA2D4Q7Z3S7 1137 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 GIPC2Q8TF65 315 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 GCNAQ96QF7 691 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 KIF3AQ9Y496 699 aa20.19■□□□□ 0.82
MSH6-206ENST00000455383 CYB561D2O14569 222 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 AXIN1O15169 862 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 ATG13O75143 517 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 RPP40O75818 363 aaKnown RBP20.18■□□□□ 0.82
MSH6-206ENST00000455383 AKAP3O75969 853 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 DDX6P26196 483 aaKnown RBP eCLIP20.18■□□□□ 0.82
MSH6-206ENST00000455383 ACOT2P49753 483 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 TAF6P49848 677 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 NLRP12P59046 1061 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 GRSF1Q12849 480 aaKnown RBP eCLIP20.18■□□□□ 0.82
MSH6-206ENST00000455383 SF3A2Q15428 464 aaKnown RBP20.18■□□□□ 0.82
MSH6-206ENST00000455383 PLA2G2CQ5R387 149 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 WSCD1Q658N2 575 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 METTL23Q86XA0 190 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 THEM5Q8N1Q8 247 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 USP13Q92995 863 aaPredicted RBP20.18■□□□□ 0.82
MSH6-206ENST00000455383 ARRDC1-AS1Q9H2J1 176 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 ST6GALNAC4Q9H4F1 302 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 DPP3Q9NY33 737 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 CCL26Q9Y258 94 aa20.18■□□□□ 0.82
MSH6-206ENST00000455383 DENND4CQ5VZ89 1909 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 CHD8Q9HCK8 2581 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 NEFLP07196 543 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 NMT1P30419 496 aaKnown RBP20.17■□□□□ 0.82
MSH6-206ENST00000455383 CDR1P51861 262 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 KBTBD6Q86V97 674 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 RIN3Q8TB24 985 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 CALML4Q96GE6 196 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 ZC3H10Q96K80 434 aaKnown RBP20.17■□□□□ 0.82
MSH6-206ENST00000455383 PYM1Q9BRP8 204 aaKnown RBP20.17■□□□□ 0.82
MSH6-206ENST00000455383 KIF9Q9HAQ2 790 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 RXFP3Q9NSD7 469 aa20.17■□□□□ 0.82
MSH6-206ENST00000455383 TISP43B9A030 160 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 PMLP29590 882 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 AVPR1AP37288 418 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 PXNP49023 591 aaPredicted RBP20.16■□□□□ 0.82
MSH6-206ENST00000455383 DHX8Q14562 1220 aaKnown RBP20.16■□□□□ 0.82
MSH6-206ENST00000455383 MCM6Q14566 821 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 ZNF268Q14587 947 aaPredicted RBP20.16■□□□□ 0.82
MSH6-206ENST00000455383 TAF12Q16514 161 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 AASDHQ4L235 1098 aaPredicted RBP20.16■□□□□ 0.82
MSH6-206ENST00000455383 TRIM68Q6AZZ1 485 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 ADALQ6DHV7 355 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 IL31Q6EBC2 164 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 SLFN12LQ6IEE8 588 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 CRELD2Q6UXH1 353 aaPredicted RBP20.16■□□□□ 0.82
MSH6-206ENST00000455383 EFCAB13Q8IY85 973 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 DCP1BQ8IZD4 617 aaKnown RBP20.16■□□□□ 0.82
MSH6-206ENST00000455383 CAMKK1Q8N5S9 505 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 MAB21L3Q8N8X9 362 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 RAD54LQ92698 747 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 EBF3Q9H4W6 596 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 TDP1Q9NUW8 608 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 TMLHEQ9NVH6 421 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 PCDHGA5Q9Y5G8 931 aa20.16■□□□□ 0.82
MSH6-206ENST00000455383 SPAG17Q6Q759 2223 aa20.15■□□□□ 0.82
MSH6-206ENST00000455383 CNOT1A5YKK6 2376 aaKnown RBP20.15■□□□□ 0.82
MSH6-206ENST00000455383 KPNA7A9QM74 516 aa20.15■□□□□ 0.82
MSH6-206ENST00000455383 UBA7P41226 1012 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms