RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ALDH1A3P47895 512 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 SATB1Q01826 763 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 POU5F1Q01860 360 aaKnown RBP17.32■□□□□ 0.36
GPC1-206ENST00000455111 TNK2Q07912 1038 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 PLD1Q13393 1074 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 E2F4Q16254 413 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 GPR158Q5T848 1215 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 SDHAF4Q5VUM1 108 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 ZC3H14Q6PJT7 736 aaKnown RBP17.32■□□□□ 0.36
GPC1-206ENST00000455111 Q6ZS52 159 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 RUBCNQ92622 972 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 GPR88Q9GZN0 384 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 EPC1Q9H2F5 836 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 SLITRK6Q9H5Y7 841 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 OLFML3Q9NRN5 406 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 ZSCAN32Q9NX65 697 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 ASB3Q9Y575 518 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 PCDHGA2Q9Y5H1 932 aa17.32■□□□□ 0.36
GPC1-206ENST00000455111 HELZP42694 1942 aaKnown RBP17.31■□□□□ 0.36
GPC1-206ENST00000455111 OTOL1A6NHN0 477 aaPredicted RBP17.31■□□□□ 0.36
GPC1-206ENST00000455111 MAN2B1O00754 1011 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 F11P03951 625 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 POLR2BP30876 1174 aaKnown RBP17.31■□□□□ 0.36
GPC1-206ENST00000455111 NASPP49321 788 aaPredicted RBP17.31■□□□□ 0.36
GPC1-206ENST00000455111 MGAT5BQ3V5L5 792 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 ARMCX5Q6P1M9 558 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 MAMSTRQ6ZN01 415 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 SV2BQ7L1I2 683 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 PDCL2Q8N4E4 241 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 PCIF1Q9H4Z3 704 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 PARD6AQ9NPB6 346 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 SEL1LQ9UBV2 794 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 CCDC39Q9UFE4 941 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 CCL26Q9Y258 94 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 NME7Q9Y5B8 376 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 CACNA1AO00555 2505 aa17.31■□□□□ 0.36
GPC1-206ENST00000455111 MED19A0JLT2 244 aaPredicted RBP17.3■□□□□ 0.36
GPC1-206ENST00000455111 MYBPHLA2RUH7 354 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 K7ESF4 209 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 GCNT3O95395 438 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 ITGB3P05106 788 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 GAP43P17677 238 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 PAX3P23760 479 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 ACAT1P24752 427 aaKnown RBP17.3■□□□□ 0.36
GPC1-206ENST00000455111 WEE1P30291 646 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 MLLT6P55198 1093 aaPredicted RBP17.3■□□□□ 0.36
GPC1-206ENST00000455111 LMBRD2Q68DH5 695 aaPredicted RBP17.3■□□□□ 0.36
GPC1-206ENST00000455111 PKN3Q6P5Z2 889 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 ACCSQ96QU6 501 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 BACH2Q9BYV9 841 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 TASP1Q9H6P5 420 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 PDE11AQ9HCR9 933 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 ABI2Q9NYB9 513 aaPredicted RBP17.3■□□□□ 0.36
GPC1-206ENST00000455111 AGAP1Q9UPQ3 857 aa17.3■□□□□ 0.36
GPC1-206ENST00000455111 MRPS17Q9Y2R5 130 aaKnown RBP17.3■□□□□ 0.36
GPC1-206ENST00000455111 SPECC1L-ADORA2AF8WAN1 911 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 NCAM2O15394 837 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 IL18RAPO95256 599 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 IDEP14735 1019 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 PDCP20941 246 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 GARTP22102 1010 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 CTHP32929 405 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 ABCD1P33897 745 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 TFAMQ00059 246 aaKnown RBP17.29■□□□□ 0.36
GPC1-206ENST00000455111 LIMS2Q7Z4I7 341 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 PDILTQ8N807 584 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 LINC00301Q8NCQ3 95 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 OR5B17Q8NGF7 314 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 SPPL2BQ8TCT7 592 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 INTS4Q96HW7 963 aaKnown RBP17.29■□□□□ 0.36
GPC1-206ENST00000455111 PI4K2AQ9BTU6 479 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 GZF1Q9H116 711 aaPredicted RBP17.29■□□□□ 0.36
GPC1-206ENST00000455111 HPS4Q9NQG7 708 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 PANK4Q9NVE7 773 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 DLL3Q9NYJ7 618 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 RBAKQ9NYW8 714 aaPredicted RBP17.29■□□□□ 0.36
GPC1-206ENST00000455111 DSEQ9UL01 958 aa17.29■□□□□ 0.36
GPC1-206ENST00000455111 SMG5Q9UPR3 1016 aaKnown RBP17.29■□□□□ 0.36
GPC1-206ENST00000455111 TUFMP49411 452 aaKnown RBP17.28■□□□□ 0.36
GPC1-206ENST00000455111 NLRP12P59046 1061 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 SRSF5Q13243 272 aaKnown RBP17.28■□□□□ 0.36
GPC1-206ENST00000455111 POSTNQ15063 836 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 SV2CQ496J9 727 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 NAIF1Q69YI7 327 aaPredicted RBP17.28■□□□□ 0.36
GPC1-206ENST00000455111 NT5DC4Q86YG4 428 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 KBTBD7Q8WVZ9 684 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 USP13Q92995 863 aaPredicted RBP17.28■□□□□ 0.36
GPC1-206ENST00000455111 E2F7Q96AV8 911 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 FAM83CQ9BQN1 747 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 MTMR12Q9C0I1 747 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 OBP2AQ9NY56 170 aa17.28■□□□□ 0.36
GPC1-206ENST00000455111 GABRDO14764 452 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 STX6O43752 255 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 EXTL3O43909 919 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 CYP2F1P24903 491 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 CASP1P29466 404 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 STAT6P42226 847 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 CCINQ13939 588 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 PON2Q15165 354 aa17.27■□□□□ 0.36
GPC1-206ENST00000455111 DDR2Q16832 855 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms