RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 PLEKHA7Q6IQ23 1121 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 PPP1R2P3Q6NXS1 205 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 ZNF365Q70YC5 407 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 TMEM176AQ96HP8 235 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 OSBPL8Q9BZF1 889 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 PLXNB2O15031 1838 aa14.46□□□□□ -0.1
CLK3-203ENST00000454830 TCF4P15884 667 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 ZNF132P52740 706 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 KRT17Q04695 432 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 POU5F1BQ06416 359 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 TCEAL1Q15170 157 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 FAM187BQ17R55 369 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 SLC27A1Q6PCB7 646 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 IPO4Q8TEX9 1081 aaKnown RBP14.45□□□□□ -0.1
CLK3-203ENST00000454830 EXOC4Q96A65 974 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 C18orf25Q96B23 403 aaPredicted RBP14.45□□□□□ -0.1
CLK3-203ENST00000454830 ELOVL4Q9GZR5 314 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 CXCL16Q9H2A7 254 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 A6NJR5 290 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 GOLGA8KD6RF30 607 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 LSM8O95777 96 aaKnown RBP14.45□□□□□ -0.1
CLK3-203ENST00000454830 EIF4BP23588 611 aaKnown RBP14.45□□□□□ -0.1
CLK3-203ENST00000454830 ADCY8P40145 1251 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 RAD23BP54727 409 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 CDO1Q16878 200 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 KRT71Q3SY84 523 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 PTPN20Q4JDL3 420 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 METTL5Q9NRN9 209 aaKnown RBP14.45□□□□□ -0.1
CLK3-203ENST00000454830 PLXNA1Q9UIW2 1896 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 PODXLO00592 558 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 RECQL4O94761 1208 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 GAS8O95995 478 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 FSCN1Q16658 493 aaKnown RBP14.45□□□□□ -0.1
CLK3-203ENST00000454830 KYAT1Q16773 422 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 KCNT1Q5JUK3 1230 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 ACOT1Q86TX2 421 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 C12orf29Q8N999 325 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 RNF169Q8NCN4 708 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 MAIP1Q8WWC4 291 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 TUBGCP4Q9UGJ1 667 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 CNTN6Q9UQ52 1028 aa14.45□□□□□ -0.1
CLK3-203ENST00000454830 PGK1P00558 417 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 PDGFRBP09619 1106 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 MYZAPP0CAP1 466 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 RPL21P46778 160 aaKnown RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 DCAF4L1Q3SXM0 396 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 FAM102AQ5T9C2 384 aaPredicted RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 TAB3Q8N5C8 712 aaPredicted RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 BEST2Q8NFU1 509 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 STRIP2Q9ULQ0 834 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 ZNF148Q9UQR1 794 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 C17orf102A2RUQ5 167 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 PPEF2O14830 753 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 MICAL2O94851 1124 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 RFC1P35251 1148 aaPredicted RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 CRHR2Q13324 411 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 IFNL1Q8IU54 200 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 LINC01465Q8N7H1 131 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 KAT2BQ92831 832 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 F2P00734 622 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 IFNB1P01574 187 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 MTMR3Q13615 1198 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 MORN1Q5T089 497 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 CXCL17Q6UXB2 119 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 MSL3Q8N5Y2 521 aaKnown RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 SLC4A11Q8NBS3 891 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 DDX27Q96GQ7 796 aaKnown RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 CPXM1Q96SM3 734 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 NT5C1AQ9BXI3 368 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 ITGA11Q9UKX5 1188 aa14.44□□□□□ -0.1
CLK3-203ENST00000454830 R3HDM2Q9Y2K5 976 aaKnown RBP14.44□□□□□ -0.1
CLK3-203ENST00000454830 M0QZ92 97 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 ITGBL1O95965 494 aaPredicted RBP14.43□□□□□ -0.1
CLK3-203ENST00000454830 SCYL2Q6P3W7 929 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 WDTC1Q8N5D0 677 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 TMEM191CA6NGB0 347 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 ZNF865P0CJ78 1059 aaPredicted RBP14.43□□□□□ -0.1
CLK3-203ENST00000454830 DARSP14868 501 aaKnown RBP14.43□□□□□ -0.1
CLK3-203ENST00000454830 ATICP31939 592 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 GRM5P41594 1212 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 DUPD1Q68J44 220 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 SAPCD2Q86UD0 394 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 JOSD2Q8TAC2 188 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 ZNF518BQ9C0D4 1074 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 HESX1Q9UBX0 185 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 GNEQ9Y223 722 aaKnown RBP14.43□□□□□ -0.1
CLK3-203ENST00000454830 MEFVO15553 781 aaPredicted RBP14.43□□□□□ -0.1
CLK3-203ENST00000454830 PSTPIP1O43586 416 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 RNF8O76064 485 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 HSPA9P38646 679 aaKnown RBP14.43□□□□□ -0.1
CLK3-203ENST00000454830 PTP4A2Q12974 167 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 UBR7Q8N806 425 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 HSPH1Q92598 858 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 APBA2Q99767 749 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 HERPUD2Q9BSE4 406 aa14.43□□□□□ -0.1
CLK3-203ENST00000454830 BARX2Q9UMQ3 279 aaPredicted RBP14.43□□□□□ -0.1
CLK3-203ENST00000454830 A8MXQ7 604 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 CILPO75339 1184 aa14.42□□□□□ -0.1
CLK3-203ENST00000454830 ECHS1P30084 290 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms