RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 CCT8L1PA6NM43 557 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 SNUPNO95149 360 aaKnown RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 RBP3P10745 1247 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 PDGFRAP16234 1089 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 GBP1P32455 592 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 SESN2P58004 480 aaPredicted RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 FASTKD3Q14CZ7 662 aaKnown RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 TMEM132BQ14DG7 1078 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 CLUL1Q15846 466 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 EFCAB12Q6NXP0 572 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 PPFIBP2Q8ND30 876 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 FEZF2Q8TBJ5 459 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 SLC38A10Q9HBR0 1119 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 RAB6BQ9NRW1 208 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 PARVAQ9NVD7 372 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 GTPBP10A4D1E9 387 aaKnown RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 CAPN9O14815 690 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 CHRNB2P17787 502 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 ARL1P40616 181 aaPredicted RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 EIF3EP60228 445 aaKnown RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 CLEC16AQ2KHT3 1053 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 LRIG3Q6UXM1 1119 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 ARMC9Q7Z3E5 817 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 C4orf19Q8IY42 314 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 ACTL9Q8TC94 416 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 SH3GL2Q99962 352 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 SENP7Q9BQF6 1050 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 UBN1Q9NPG3 1134 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 TJP2Q9UDY2 1190 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 HES2Q9Y543 173 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 NR2E3Q9Y5X4 410 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 CDK5RAP2Q96SN8 1893 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 ADGRA3Q8IWK6 1321 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 EXTL3O43909 919 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 LUC7L3O95232 432 aaKnown RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 ZBED1O96006 694 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 KRT4P19013 534 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 ATXN3P54252 364 aaPredicted RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 RNASELQ05823 741 aaKnown RBP11.75□□□□□ -0.53
DDR1-240ENST00000454612 DUPD1Q68J44 220 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 SLFN12LQ6IEE8 588 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 CYB5D1Q6P9G0 228 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 SPATA18Q8TC71 538 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 TRAIPQ9BWF2 469 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 HAO1Q9UJM8 370 aa11.75□□□□□ -0.53
DDR1-240ENST00000454612 ZMYM2Q9UBW7 1377 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 ADM5C9JUS6 153 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 OATP04181 439 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 PECAM1P16284 738 aaPredicted RBP11.74□□□□□ -0.53
DDR1-240ENST00000454612 DSG3P32926 999 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 JAM2P57087 298 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 PDE1BQ01064 536 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 OTUD4Q01804 1114 aaKnown RBP11.74□□□□□ -0.53
DDR1-240ENST00000454612 PSMD6Q15008 389 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 PKN2Q16513 984 aaKnown RBP11.74□□□□□ -0.53
DDR1-240ENST00000454612 NPNTQ6UXI9 565 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 ETAA1Q9NY74 926 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 TXNDC9O14530 226 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 KCNN4O15554 427 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 NPTXRO95502 500 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 NME3Q13232 169 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 HIF1AQ16665 826 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 SUPT20HL1Q3ZLR7 823 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 FAM71AQ8IYT1 594 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 GLIS1Q8NBF1 620 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 KIF12Q96FN5 646 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 MRPL4Q9BYD3 311 aaKnown RBP11.74□□□□□ -0.53
DDR1-240ENST00000454612 DNM1LO00429 736 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 TRAPPC3O43617 180 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 TROVE2P10155 538 aaKnown RBP eCLIP11.74□□□□□ -0.53
DDR1-240ENST00000454612 RARGP13631 454 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 FNTAP49354 379 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 MARSP56192 900 aaKnown RBP11.74□□□□□ -0.53
DDR1-240ENST00000454612 AUHQ13825 339 aaKnown RBP11.74□□□□□ -0.53
DDR1-240ENST00000454612 BMPR2Q13873 1038 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 LRRC36Q1X8D7 754 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 SCARA3Q6AZY7 606 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 TXNRD3NBQ6F5E7 133 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 LVRNQ6Q4G3 990 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 CATSPER4Q7RTX7 472 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 VSIG10LQ86VR7 867 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 AGBL3Q8NEM8 1001 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 CFAP61Q8NHU2 1237 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 VPS33BQ9H267 617 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 DIS3Q9Y2L1 958 aaKnown RBP11.74□□□□□ -0.53
DDR1-240ENST00000454612 SCINQ9Y6U3 715 aa11.74□□□□□ -0.53
DDR1-240ENST00000454612 SMCHD1A6NHR9 2005 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.73□□□□□ -0.53
DDR1-240ENST00000454612 CCDC189A1A4V9 331 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 AGTP01019 485 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 MMRN1Q13201 1228 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 KIZQ2M2Z5 673 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 AGBL2Q5U5Z8 902 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 ISLR2Q6UXK2 745 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 EXOC3L1Q86VI1 746 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 TRPM4Q8TD43 1214 aa11.73□□□□□ -0.53
DDR1-240ENST00000454612 CLEC4DQ8WXI8 215 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms