RNA–Protein interactions for RNA: ENST00000454141.5

SEC22C-212, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22C, Length 780 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-212ENST00000454141 SNX21Q969T3 373 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 GCNAQ96QF7 691 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 TRIM9Q9C026 710 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 PDE11AQ9HCR9 933 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 KBTBD4Q9NVX7 518 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 L1RE1Q9UN81 338 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 PATJQ8NI35 1801 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 SCN1AP35498 2009 aa19.71■□□□□ 0.75
SEC22C-212ENST00000454141 KIAA0391O15091 583 aaKnown RBP19.7■□□□□ 0.74
SEC22C-212ENST00000454141 CHADO15335 359 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 KINO60870 393 aaKnown RBP19.7■□□□□ 0.74
SEC22C-212ENST00000454141 CUTAO60888 179 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 CDC25CP30307 473 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 CYP4F8P98187 520 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 TSPY1Q01534 308 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 BFSP1Q12934 665 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 TAF12Q16514 161 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 PDCL2Q8N4E4 241 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 CSGALNACT2Q8N6G5 542 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 GLIS3Q8NEA6 775 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 CXorf38Q8TB03 319 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 CSGALNACT1Q8TDX6 532 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 GIPC2Q8TF65 315 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 HPS3Q969F9 1004 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 DHX58Q96C10 678 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 MSANTD3Q96H12 275 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 FAM84AQ96KN4 292 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 MTMR12Q9C0I1 747 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 IL21Q9HBE4 155 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 PCDHB5Q9Y5E4 795 aa19.7■□□□□ 0.74
SEC22C-212ENST00000454141 RIF1Q5UIP0 2472 aaKnown RBP19.7■□□□□ 0.74
SEC22C-212ENST00000454141 WDR87Q6ZQQ6 2873 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 DPYSL4O14531 572 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 HUS1O60921 280 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 KRT19P08727 400 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 TMEM191BP0C7N4 346 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 ASIC1P78348 528 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 AMPD3Q01432 767 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 MTAPQ13126 283 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 NFE2Q16621 373 aaPredicted RBP19.69■□□□□ 0.74
SEC22C-212ENST00000454141 FOXD4L5Q5VV16 416 aaPredicted RBP19.69■□□□□ 0.74
SEC22C-212ENST00000454141 SHC4Q6S5L8 630 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 GPIHBP1Q8IV16 184 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 TMEM86AQ8N2M4 240 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 IQUBQ8NA54 791 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 FOXD4L4Q8WXT5 416 aaPredicted RBP19.69■□□□□ 0.74
SEC22C-212ENST00000454141 CHRDQ9H2X0 955 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 TASP1Q9H6P5 420 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 PRMT8Q9NR22 394 aaPredicted RBP19.69■□□□□ 0.74
SEC22C-212ENST00000454141 TMLHEQ9NVH6 421 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 OBP2AQ9NY56 170 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 PCDHGA2Q9Y5H1 932 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 FAM186AA6NE01 2351 aa19.69■□□□□ 0.74
SEC22C-212ENST00000454141 EIF3DO15371 548 aaKnown RBP eCLIP19.68■□□□□ 0.74
SEC22C-212ENST00000454141 PRAMEF12O95522 483 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 CCNE1P24864 410 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 WEE1P30291 646 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 MLLT6P55198 1093 aaPredicted RBP19.68■□□□□ 0.74
SEC22C-212ENST00000454141 RBP5P82980 135 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 SCARA3Q6AZY7 606 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 HSCBQ8IWL3 235 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 LEO1Q8WVC0 666 aaPredicted RBP19.68■□□□□ 0.74
SEC22C-212ENST00000454141 ANKRD36BP1Q96IX9 119 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 LRRC3BQ96PB8 259 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 ACBD6Q9BR61 282 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 IER2Q9BTL4 223 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 GDAP2Q9NXN4 497 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 DDX43Q9NXZ2 648 aaKnown RBP19.68■□□□□ 0.74
SEC22C-212ENST00000454141 SIX4Q9UIU6 781 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 GVINP1Q7Z2Y8 2422 aa19.68■□□□□ 0.74
SEC22C-212ENST00000454141 PTPRZ1P23471 2315 aaPredicted RBP19.68■□□□□ 0.74
SEC22C-212ENST00000454141 TICRRQ7Z2Z1 1910 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 ZNF233A6NK53 670 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 SLC38A8A6NNN8 435 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 PDIA4P13667 645 aaKnown RBP19.67■□□□□ 0.74
SEC22C-212ENST00000454141 KPNA1P52294 538 aaPredicted RBP19.67■□□□□ 0.74
SEC22C-212ENST00000454141 MYL7Q01449 175 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 ARHGAP29Q52LW3 1261 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 FAM26FQ5R3K3 315 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 LMBRD2Q68DH5 695 aaPredicted RBP19.67■□□□□ 0.74
SEC22C-212ENST00000454141 CNNM4Q6P4Q7 775 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 C1orf228Q6PIY5 440 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 TSSK4Q6SA08 328 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 CBWD2Q8IUF1 395 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 ZBTB44Q8NCP5 570 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 SPATA18Q8TC71 538 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 ATRIPQ8WXE1 791 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 PI4K2AQ9BTU6 479 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 C8orf33Q9H7E9 229 aaPredicted RBP19.67■□□□□ 0.74
SEC22C-212ENST00000454141 LMAN1LQ9HAT1 526 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 INTS13Q9NVM9 706 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 ZSCAN32Q9NX65 697 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 HSPBP1Q9NZL4 362 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 SNX9Q9Y5X1 595 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 PTPRJQ12913 1337 aa19.67■□□□□ 0.74
SEC22C-212ENST00000454141 PRPF40AO75400 957 aaKnown RBP19.66■□□□□ 0.74
SEC22C-212ENST00000454141 TNNC2P02585 160 aa19.66■□□□□ 0.74
SEC22C-212ENST00000454141 HSP90AA1P07900 732 aaKnown RBP19.66■□□□□ 0.74
SEC22C-212ENST00000454141 ZSCAN22P10073 491 aaPredicted RBP19.66■□□□□ 0.74
SEC22C-212ENST00000454141 ACAT1P24752 427 aaKnown RBP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms