RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 DDX28Q9NUL7 540 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 GGA3Q9NZ52 723 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 SEPT3Q9UH03 358 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 SLC24A2Q9UI40 661 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 E5RI56 91 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 RPS6KA5O75582 802 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 POLBP06746 335 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 KCNA2P16389 499 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 CDH2P19022 906 aaPredicted RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 ADORA2BP29275 332 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 TMED10P49755 219 aaKnown RBP12.57□□□□□ -0.4
SEC16A-207ENST00000453963 RAD51Q06609 339 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 NME3Q13232 169 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 SCUBE1Q8IWY4 988 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 TNIP3Q96KP6 325 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 TLR10Q9BXR5 811 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 GDF3Q9NR23 364 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 LZTS1Q9Y250 596 aa12.57□□□□□ -0.4
SEC16A-207ENST00000453963 GTPBP10A4D1E9 387 aaKnown RBP12.56□□□□□ -0.4
SEC16A-207ENST00000453963 FKBP6O75344 327 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 PRKCBP05771 671 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 NR3C2P08235 984 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 HSD17B4P51659 736 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 ZNF571Q7Z3V5 609 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-207ENST00000453963 RNF149Q8NC42 400 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 TEX12Q9BXU0 123 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 TRIM54Q9BYV2 358 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 PAPOLBQ9NRJ5 636 aaKnown RBP12.56□□□□□ -0.4
SEC16A-207ENST00000453963 HADHAP40939 763 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 SLC44A4Q53GD3 710 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 SYCP2LQ5T4T6 812 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 WLSQ5T9L3 541 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 ELMOD1Q8N336 334 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 SPON2Q9BUD6 331 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 SP110Q9HB58 689 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 LRRC10BA6NIK2 292 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 HNRNPCL2B2RXH8 293 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 PJA2O43164 708 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 ATXN8OSP0DMR3 200 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 MRPS15P82914 257 aaKnown RBP12.56□□□□□ -0.4
SEC16A-207ENST00000453963 ZNF844Q08AG5 666 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 MXD4Q14582 209 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-207ENST00000453963 TAF1CQ15572 869 aaPredicted RBP12.56□□□□□ -0.4
SEC16A-207ENST00000453963 MEA1Q16626 185 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 SPDYCQ5MJ68 293 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 MOXD1Q6UVY6 613 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 TMC3Q7Z5M5 1100 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 ADCK1Q86TW2 530 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 ASIC4Q96FT7 647 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 PPP1R36Q96LQ0 422 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 C15orf41Q9Y2V0 281 aa12.56□□□□□ -0.4
SEC16A-207ENST00000453963 GFAPP14136 432 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 ATICP31939 592 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 GMPSP49915 693 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 AASDHQ4L235 1098 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 FOXR1Q6PIV2 292 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 CDR2LQ86X02 465 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 TEKT2Q9UIF3 430 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SLC37A4O43826 429 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 TPI1P60174 286 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 CREG2Q8IUH2 290 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 C1orf131Q8NDD1 294 aaKnown RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 ASAP3Q8TDY4 903 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 KIF12Q96FN5 646 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 PGM2Q96G03 612 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 EGFL8Q99944 293 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SARS2Q9NP81 518 aaKnown RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 MOSPD1Q9UJG1 213 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 DIP2AQ14689 1571 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 STRNO43815 780 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 PPP4CP60510 307 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 ERVK-9P63128 1117 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 STX5Q13190 355 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 PTK2BQ14289 1009 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SEC23AQ15436 765 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 TRMT5Q32P41 509 aaKnown RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 TKFCQ3LXA3 575 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 C11orf63Q6NUN7 778 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 FUKQ8N0W3 1084 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 CLEC4FQ8N1N0 589 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 HDAC7Q8WUI4 952 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SCFD1Q8WVM8 642 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SEPT1Q8WYJ6 367 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SIK2Q9H0K1 926 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SEMA4AQ9H3S1 761 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 GID8Q9NWU2 228 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 GGA2Q9UJY4 613 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 FARP1Q9Y4F1 1045 aaPredicted RBP12.55□□□□□ -0.4
SEC16A-207ENST00000453963 ZNF197O14709 1029 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 EXTL3O43909 919 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 KRT8P05787 483 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 APOA4P06727 396 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 ATP6V1B1P15313 513 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 RBP5P82980 135 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SLC15A2Q16348 729 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 BTBD8Q5XKL5 378 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 SZRD1Q7Z422 152 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 AFG1LQ8WV93 481 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 CYGBQ8WWM9 190 aa12.55□□□□□ -0.4
SEC16A-207ENST00000453963 LZICQ8WZA0 190 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms